Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0770 ATGATTCTTCCAAGGGAGACTAAGAACGACCCTGTTCTTATTGAAGAACCAGGTATGGGTAAGACTGCTGTTGTTGAAAGATTAGCTCAGAAAATTGTAAGAGGGGGTGTTCCCAGTAATCTCGCTGAAGTAAGACCTATGGCATTGGATATGGGTGCTTTGGTTGCTGGGGCAAAATATAGGGGAGAGGTACGTTCATGGCCTTGA 207 0.4493 MILPRETKNDPVLIEEPGMGKTAVVERLAQKIVRGGVPSNLAEVRPMALDMGALVAGAKYRGEVRSWP* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0770 68 PANTHER ATP-DEPENDENT CLP PROTEASE 2 64 - -
Vvi16g0770 68 Gene3D - 1 66 IPR027417 -
Vvi16g0770 68 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 65 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0770 Vvi-Chr16 15560187 15560393 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0770 K03695 - vvi:104882165 137.502