Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0769 ATGGTGATGGAGTATTCGTTAGTAGATCTCATAAGACATGTGATACAGGTCGGGACCATGATACGTTTCTTAGTGAAGAGTTTAGATGAGGAAATACTTCAAATATCTGGATCTTTAAATCCACCTCACACAGGAAGTTTGTTTATGATATTCTGTTCGAGCCAAAGCCTTGCAGCCCGGAATGGAACCTCACCATTCCCATATTTTGCAACAACTAGGAACTTGGAGATCAGTCTGGATCAAAAGACTGGTTCTGAGCTTGTCTCTTCAAATATTTTCCTCCATGGATACTTCAGTGCCTCCATTAAACTACCAAGAAGCCAGGGCACTGTAGGAGTTGTGGTTGCGTTTGATTCCATGAATCAAGATAGATACAGCAAGAACCAGGACGAAGTGACCTTCGAGATCTTAGGAAACGTCAAAGGCAAAGAGTGGGCGGTTCAGACCAATGTTCATGGCAATACAACCATCAGAAACAGCACCAGTAAAGGAAGAGAAGAGCGCTACACCCTCCGGTTCGACCCATCTGCAGATTTTCACAAGTACAGTATCTTCTGGACTGAAAACCATATCATATTTTATGTTGATGATGTCCCCATAAGATTGTTCATGAGGATAAAAGCCATAGGAAACTACTTCATCGCTAGTCCAATGTATGTGCATGGCTCAATATGGGACACGTCAGATTGGACCACTGATGGAGGAAAACAGAAAGTGGATTACAGGTATGGCCCATTTACTGCTACAAGTTCATGA 756 0.4259 MVMEYSLVDLIRHVIQVGTMIRFLVKSLDEEILQISGSLNPPHTGSLFMIFCSSQSLAARNGTSPFPYFATTRNLEISLDQKTGSELVSSNIFLHGYFSASIKLPRSQGTVGVVVAFDSMNQDRYSKNQDEVTFEILGNVKGKEWAVQTNVHGNTTIRNSTSKGREERYTLRFDPSADFHKYSIFWTENHIIFYVDDVPIRLFMRIKAIGNYFIASPMYVHGSIWDTSDWTTDGGKQKVDYRYGPFTATSS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0769 251 SUPERFAMILY Concanavalin A-like lectins/glucanases 78 249 IPR013320 -
Vvi16g0769 251 Gene3D - 57 251 - -
Vvi16g0769 251 Pfam Glycosyl hydrolases family 16 72 242 IPR000757 GO:0004553|GO:0005975
Vvi16g0769 251 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 34 250 IPR000757 GO:0004553|GO:0005975
Vvi16g0769 251 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 71 249 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0769 Vvi-Chr16 15489819 15491820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0769 73 248 Glycoside Hydrolase AT2G01850 53.977 2.21e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0769 K08235 - vvi:100267817 367.081