Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0741 ATGGGTTTCACCCACCAAGGAAGTCTTGGCCCAACGAAAGGCGAAGCTTATAGAGATAATGATCGGACATCTGTTAATGACCCAGTTCTTGCATACACAATATGGCAATCTGGACTTAACAAATTATTTTCTGATATTAAGATTCGAGGGAAGGTTGCTGTTGGGCTGAATCCAAATATCAGATTTTACAGGTACAAGGTTGGTCAGCGCTTTGGTCGACATATTGATGAAAGTGTTGATCTTGGAGAGGGAAAGCGTACCCATTATACTTTGTTAATATATTTAAGTGGTGGTTCAAAACAGAAAACTAAAGGTGTTCAAAGCAATGTTGGGGATTCTTCTTCAGAGCCTCTAGTTGGTGGAGAGACTGTCTTCTATGGTTCACGAAATGGTATTGTGGCTGAGGTGGCTCCTACTGAGGGGATGGCTCTCCTGCATATTCATGGGGATATGTGTATGTTGCATGAAGCAAGAAATGTTACCAAGGGTATCAAGTATGTTTTCCGTTCAGACGTAGCTTTTGCTTGA 528 0.4167 MGFTHQGSLGPTKGEAYRDNDRTSVNDPVLAYTIWQSGLNKLFSDIKIRGKVAVGLNPNIRFYRYKVGQRFGRHIDESVDLGEGKRTHYTLLIYLSGGSKQKTKGVQSNVGDSSSEPLVGGETVFYGSRNGIVAEVAPTEGMALLHIHGDMCMLHEARNVTKGIKYVFRSDVAFA* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0741 175 MobiDBLite consensus disorder prediction 1 21 - -
Vvi16g0741 175 Gene3D q2cbj1_9rhob like domain 2 170 - -
Vvi16g0741 175 SMART p4hc 2 173 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi16g0741 175 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 13 169 IPR045054 -
Vvi16g0741 175 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 55 175 IPR005123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0741 - - vvi:100262964 357.451