Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0736 ATGGCTAAAAATCCCACCTCAGGCAATTATGAAGATCTTCCCCTAAATACAGGAGGAGCAGACAATAAAAGTTCACTGGTGGTTTGCTTTGGGGAAATGTTGATTGACTTTGTGCCAACAGTTGGTGGAGTTTCACTTGCAGAGGCACCGGCTTTCAAGAAAGCCGCTGGCGGTGCTCCTGCTAATGTTGCTGTTGGCATATCGAAATTGGGAGGTTCATCCGCTTTTATTGGCAAGGTTGGCGATGATGAGTTTGGTCATATGTTGGCTGACATTTTGAAGAAAAACAATGTCAACAATTCTGGCATGCGGTTTGATCACAGTGCAAGGACTGCACTAGCATTTGTTTCACTCAGAGCTGATGGTGAACGAGAATTTTTGTTTTTCCGTAATCCAAGCGCTGATATGCTTTTCCATGAATCAGAACTTGATTTAAAACTTCTTGAGCAGGCAAAAATCTTTCACTATGGTTCAATTAGTTTGATTGAGGAACCATGTAGGTCAACTCATCTTGCTGCAATGACCATTGCCAAAAAGGCTGGTAGCATCCTTTCGTATGATCCGAATCTTAGATTGAAACTATGGCCATCAGCAGAGGCTGCTAGGAAGGGAATAATGAGTGTATGGGACAAAGCAGATATCATTAAGGTAAGTGAGGATGAAATTACATTCTTAACTGGTGGTGATGATCCTTGTGATGACAATGTTGTGTTAAAGAAGCTTTTTCATCCTAACCTCAAGCTTTTGGTCGTGACTGAAGGGTCAGAGGGTTGCAGATATTATACTAAGAAATTTCGGGGTAGGGTTGCTGGTATTAAAGTTAAAGCTGTTGACACAACTGGTGCTGGTGATGCATTTGTAAGTGGGATCCTCAGCAATATAGCTTCAGACATAAATCTCTATCAGGACGAAAAACGGTTAAGAGAAGCTCTTGTTTTTGCAAATGTATGCGGCGCCCTCACAGTGAGAGAGAGAGGAGCGATTCCAGCGCTCCCCAACAAAGAGGCAGTCCTCAAGATGTTGCAAAACATCCCAGAATGA 1041 0.4275 MAKNPTSGNYEDLPLNTGGADNKSSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAAGGAPANVAVGISKLGGSSAFIGKVGDDEFGHMLADILKKNNVNNSGMRFDHSARTALAFVSLRADGEREFLFFRNPSADMLFHESELDLKLLEQAKIFHYGSISLIEEPCRSTHLAAMTIAKKAGSILSYDPNLRLKLWPSAEAARKGIMSVWDKADIIKVSEDEITFLTGGDDPCDDNVVLKKLFHPNLKLLVVTEGSEGCRYYTKKFRGRVAGIKVKAVDTTGAGDAFVSGILSNIASDINLYQDEKRLREALVFANVCGALTVRERGAIPALPNKEAVLKMLQNIPE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0736 346 FunFam Probable fructokinase-2 23 344 - -
Vvi16g0736 346 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 278 291 IPR002173 GO:0016301
Vvi16g0736 346 PRINTS Ribokinase signature 52 71 IPR002139 GO:0016301
Vvi16g0736 346 PRINTS Ribokinase signature 249 260 IPR002139 GO:0016301
Vvi16g0736 346 PRINTS Ribokinase signature 207 222 IPR002139 GO:0016301
Vvi16g0736 346 SUPERFAMILY Ribokinase-like 27 341 IPR029056 -
Vvi16g0736 346 CDD bac_FRK 26 328 - -
Vvi16g0736 346 PANTHER HEXOKINASE FAMILY MEMBER 26 339 - -
Vvi16g0736 346 Gene3D - 22 345 IPR029056 -
Vvi16g0736 346 Pfam pfkB family carbohydrate kinase 26 333 IPR011611 -
Vvi16g0736 346 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 57 81 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0736 Vvi-Chr16 14959252 14964384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0736 K00847 - vvi:100250938 667.151