Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0733 ATGTCTATAGTTTGTGTCGAAGGTAACCCACCATCCATGTTTAATCCGCCTACAGACGACCACAAAAACCAGGAACCACTAGTGTTTGATGCCTCGGTTCTTCGGCACCAATCCAACATTCCCAAGCAGTTCATATGGCCGGATGCAGAAAAGCCAGGGGACAAGGCCACAGAGCTGTCTGTTCCACTCATAGACTTGGGAGGCTTCCTCTCTGGAGACCCTGCTGCAGCCATGGAAGCAACTAGGCTTGTGAGGGAGGCATGCCAGAAGCATGGCTTCTTCCTTGTTGTTAACCATGGGGTTGATGATAAACTCATATACAAAGCTCACCAGTACATGGACAGCTTCTTTGGGTTGCCTTTGGCCAAGAAGCAAAGGGCTCAGAGGAAGCTGGGTGAGCACTGTGGATATGCCAGCAGCTTCATTGGCAGGTTCTCTTCCAAGCTGCCATGGAAAGAGACCCTTTCTTTCAGCTATTCAGCTGAGAAGAAGTCATCCAATGCTGTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGGCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGATCATGGAGCTGCTGGGGATGAGCCTGGGTATAGGCGGAGCCCATTTCAGGGAATTTTTCGAGGAAAACGATTCGATAATGAGACTCAACTACTACCCCCCATGCCTAAAACCCGACCTCACTTTAGGAACAGGGCCTCATTGTGATCCAACATCTTTAACCATCCTTCATCAGGACCAAGTGGGTGGCCTTCAAGTGTTTGTAGATGACAAATGGTGGTCCATTAGCCCAAATTTCGATGCCTTTGTTGTTAACATCGGCGACACCTTCATGGCTCTTTCAAATGGAAGGTACAAGAGCTGCTTACATAGGGCAGTGGTAAACAGCCAAACTCCAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAGAGAAAGATAAGGTGGTGAGGCCACCAACTGAACTGGTGGACACCAACAGCCCTAGAATATATCCGGATTTCACTTGGTCCAATCTCCTCGAATTCACCCAGAAGCATTACAGGGCTGACATGAAAACACTTGAGGTTTTCTCTAGCTGGCTTCAACAGAAAACAGCTGAAGCGGTGTAA 1149 0.4804 MSIVCVEGNPPSMFNPPTDDHKNQEPLVFDASVLRHQSNIPKQFIWPDAEKPGDKATELSVPLIDLGGFLSGDPAAAMEATRLVREACQKHGFFLVVNHGVDDKLIYKAHQYMDSFFGLPLAKKQRAQRKLGEHCGYASSFIGRFSSKLPWKETLSFSYSAEKKSSNAVQEYFLNKMGEDFSEFGQVYQDYCEAMSTLSLVIMELLGMSLGIGGAHFREFFEENDSIMRLNYYPPCLKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDDKWWSISPNFDAFVVNIGDTFMALSNGRYKSCLHRAVVNSQTPRKSLAFFLCPEKDKVVRPPTELVDTNSPRIYPDFTWSNLLEFTQKHYRADMKTLEVFSSWLQQKTAEAV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0733 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 173 IPR026992 -
Vvi16g0733 382 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Vvi16g0733 382 SUPERFAMILY Clavaminate synthase-like 33 363 - -
Vvi16g0733 382 Gene3D - 31 362 IPR027443 -
Vvi16g0733 382 PRINTS Isopenicillin N synthase signature 248 269 - -
Vvi16g0733 382 PRINTS Isopenicillin N synthase signature 283 309 - -
Vvi16g0733 382 PRINTS Isopenicillin N synthase signature 84 101 - -
Vvi16g0733 382 FunFam Gibberellin 20 oxidase 2 31 361 - -
Vvi16g0733 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 323 IPR005123 -
Vvi16g0733 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 61 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0733 Vvi-Chr16 14861538 14862969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0733 38 364 Glycosyltransferase AT5G59530 28.696 7.22e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0733 K05282 - vvi:100232996 791.571