Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0717 ATGTCTTTCTATAGAAGAGCCAAGTCTGCATTCAATGCGCTTCGGAGCGCAATACCCAGAACCCCAATTCAGGAACCCACCTCCAGAATCACCCACAATCCTTCTTCGATTTACAGCTCAAATAATTCTAGGGTTTCTGGGTTTTCTCCGTTCTCTTTGATTTCTTGCCAAATTGGACTAAAGCGGTGCTACCCCAATCCATTTCTTGGTGGCGCAAGGCGGTACTACTATGTCGATCGGTACCGCGTTCAGCATTTCAGGCCGCGAGGACCGCGAAGGTGGTTTCAGAATCCAAGGACTGTGTTCATTGTTGTAGTGGTGGGGTCTGGGGTTCTGATCACTGTGTATTTTGGGAATTTGGAGGCGATTCCGTACACAAACAGGACCCATTTCGTGCTTTTGTCGAGAAGCATGGAAAGAAGAATAGGGGAGGCGCAGTTTGAGCAGCTCAAAGGCACCTTTAAGGGCAAGATACTGCCGGCGATTCACCCAGATAGTGTGCGTGTGAGGTTGATATCAAACGATATAATCAAGGCGTTGCAGAGAGGGTTGAGTCATGAACGAGTGTGGAGCGATCCAGGGTATGCGGCGGAAGGGGATTTTATGGTTGATGAAGCGAGGACGCGTGAAACATTGGCAGCATTGATGGACACCCCTCCGGGGAAGTGGCATAAAGATGATGAGATTCTTGATGATAAGTGGGTTCATCAGAGTAGGAAGGAGGCTCAAGAACGTGGGTCACGGCCAACGACCCAGCATTTGGAAGGATTGAACTGGGAGGTTCTGGTGGTGAATGAGCCTGTTGTGAACGCCTTCTGTTTGCCCGGTGGGAAAATTGTGGTTTTTACGGGATTGTTAGAGCATTTTAGGACGGATGCCGAGATTGCAACCATCATTGGGCATGAGATTGGGCATGCTGTGGCTCGGCATGCAGCAGAAGGGATAACAAAAAACCTGTGGTTTGCCATTCTGCAATTGATACTTTATCAGTTCATTATGCCTGATGTTGTCCATGCAATGTCCACTCTCCTTCTAAGGCTTCCTTTTTCAAGGAGGATGGAAATGGAGGCAGATTACATTGGCTTGCTGTTGATGGCCTCAGCAGGATACGACCCTCGAATAGCACCCAGAGTGTATGAGAAGTTGGGGAAGGTGGCAGGGGATTCGACACTAAAAGATTATCTTTCTACCCATCCATCTGGTAAGAAGAGAGCTCAATTGCTGGCTCAAGCCAAAGTCATGGAGGAAGCCCTCACTTTATACCGGGAAGCAAGAGCAGGCCGAGGAATCGAAGGTTTTCTTTAG 1305 0.4866 MSFYRRAKSAFNALRSAIPRTPIQEPTSRITHNPSSIYSSNNSRVSGFSPFSLISCQIGLKRCYPNPFLGGARRYYYVDRYRVQHFRPRGPRRWFQNPRTVFIVVVVGSGVLITVYFGNLEAIPYTNRTHFVLLSRSMERRIGEAQFEQLKGTFKGKILPAIHPDSVRVRLISNDIIKALQRGLSHERVWSDPGYAAEGDFMVDEARTRETLAALMDTPPGKWHKDDEILDDKWVHQSRKEAQERGSRPTTQHLEGLNWEVLVVNEPVVNAFCLPGGKIVVFTGLLEHFRTDAEIATIIGHEIGHAVARHAAEGITKNLWFAILQLILYQFIMPDVVHAMSTLLLRLPFSRRMEMEADYIGLLLMASAGYDPRIAPRVYEKLGKVAGDSTLKDYLSTHPSGKKRAQLLAQAKVMEEALTLYREARAGRGIEGFL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0717 434 Gene3D Metalloproteases ("zincins"), catalytic domain 236 314 - -
Vvi16g0717 434 Pfam Peptidase family M48 232 410 IPR001915 GO:0004222|GO:0006508
Vvi16g0717 434 PANTHER METALLOENDOPEPTIDASE OMA1 83 426 - -
Vvi16g0717 434 CDD M48C_Oma1_like 256 417 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0717 K23010 - vvi:100253134 850.121