Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0715 ATGGTGAAAGCTGTTTCCTTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCACTCGGCCTCCATCTTCATCTTCTCACAAGCCCAGTCGATTGTTTCACAGCCTCAGGTTCTCAAATCCAAAGATTTCACTAACATCCAGAATGTTGGGAGCTGTTCTTTCACAGTGGTCATAAAGACAAGCTGCTCGTCGGTCTCATTCACAAGAGATCAAATCAGTCTGGCCTTTGGTGATGCCTATGGCAATCAGGTTTATGCCCCAAGAATAGATGACCCATCAACAAGGACGTTTGAAAGGTGTTCAACAGACACGTTCCAGATAAATGGACCATGTACATACCAGGTATGTCATGTAGCTCTCTACAGAAGTGGAATGGACGGTTGGAAACCAGAGAGCGTGAAGATCTACGGCTACAATTCGAGTCCGGTGACGTTCTACTACAATGCTTTTGTTCCAAGTGGAGTATGGTTTGGATTTGATTACTGTGGGAGGGCTGGACAATCTCCTCCACTACTTCGTTCCTCTGGAAAATGGTTTCTAGGTGCCATTCCTGGATTTCTCCTCAATGCTATGGTCTAG 576 0.4514 MVKAVSFLLPLLLLLLHSASIFIFSQAQSIVSQPQVLKSKDFTNIQNVGSCSFTVVIKTSCSSVSFTRDQISLAFGDAYGNQVYAPRIDDPSTRTFERCSTDTFQINGPCTYQVCHVALYRSGMDGWKPESVKIYGYNSSPVTFYYNAFVPSGVWFGFDYCGRAGQSPPLLRSSGKWFLGAIPGFLLNAMV* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0715 191 CDD PLAT 51 161 - -
Vvi16g0715 191 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 7 163 - -
Vvi16g0715 191 Pfam Embryo-specific protein 3, (ATS3) 46 161 IPR010417 -
Vvi16g0715 191 Gene3D PLAT/LH2 domain 50 153 - -
Vvi16g0715 191 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 157 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0715 Vvi-Chr16 14549207 14550257 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0715 - - vvi:100258419 378.637