Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0714 ATGTCCCAAAGTTGGAGAGCAAAGATCAAATTATGCTTATGCTTTGGAGAAAGGATGAAAAGTGTTTATTTTCTCCTTCACTTAGCTTCCATATTCATCTTCTCACAAGCTCAATCAATAGTTTCACACCCTCATGCTCTCAAATCCCAAAATTTCAATTCCATCCAGAAAGTTGGGAGGACCTGTTCTTTCGTAGTGATCATAAAGACAAGCTGCTCATCAATCCAATTTACAAGAGATCAAATCAGTCTGGCCTTTGGTGATGCCTATGGCAATAAGATATATGCCCCAAGAATAGATGACCCAACATCAAGGAGATTTGAAAGGTGTGTATCAGATACATTTCAACTATCAGGAGAATGCACGTACCAGATTTGTCATGTGGCTTTCTATAGAAGTGGATCGGACGGCTGGAAGCCAGAGAGTGTGACCATCTACGGTTTCAATTCCAGACCTGTTACATTCTACTACAAAAGGTTTATTCCCAAAGGAATTTGGTTTGGATTTAATCATTGTTCTAAGGCTTCAGGCTTCAGGCTTCAGGCTTCATAA 552 0.3986 MSQSWRAKIKLCLCFGERMKSVYFLLHLASIFIFSQAQSIVSHPHALKSQNFNSIQKVGRTCSFVVIIKTSCSSIQFTRDQISLAFGDAYGNKIYAPRIDDPTSRRFERCVSDTFQLSGECTYQICHVAFYRSGSDGWKPESVTIYGFNSRPVTFYYKRFIPKGIWFGFNHCSKASGFRLQAS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0714 183 CDD PLAT 62 172 - -
Vvi16g0714 183 Pfam Embryo-specific protein 3, (ATS3) 55 172 IPR010417 -
Vvi16g0714 183 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 58 169 IPR036392 GO:0005515
Vvi16g0714 183 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 24 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0714 Vvi-Chr16 14544659 14545432 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0714 - - vvi:100854618 343.584