Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0713 ATGCTTCCCGTTTCCGATAACCCCTCGACGGAACTCCACAAAAAACCCAAAACCCCTCTCTTGTTTGATCGAAAGAGCTCTTTCAGCTCGCTCCAAGCTTATTTCTCGGTTTACCACCCTCGCACATGGCTCATCTTCACCATTCTTCTTCTCCAAGTTCTCCTTTTATTCATGGCTCGTTCTCTCCCCATATCCATCTCCATTCCTCGCAACCGCCAACACTTCCCGACACCTTTCACCGCTCCCGCCGTCCAAGTCTCCGGCAACCCAGAATGTGCCTTCGGCAAGGTCTATGTCTACGATCTCCCTTCGTTCTTCAACCGGGAACTGGTGAAGAACTGCGACAAATTGAACCCGTGGAGCTCGCGGTGTGACACGCTGACGAACGACGGGTTCGGCCAGAGAGCCACTGGACTCGCCGGTGTAGTGCCGGAGGATCTGATGCCGGCGTGGTACTGGACGGACCAGTTCGTGACGGAGATTATCTTCCACAACCGGATTTTGAAGCACCCGTGTAGAACGTTTGAGCCAGAATCTGCTACGGCGTACTTCATACCGTTTTACGCTGGACTCGCAGTTGGCAAGTATCTTTGGTCGAATTGCAGCCGTCAGGATCGCGATCGGCACGGCGAGATGTTGCTGACGTGGGTCAGGGACCAGCCGTACTGGAACAGATCCAACGGCTGGGATCACTTCATCACACTCGGTCGAATCACGTGGGACTTCCGACGGTCCAAAGACGAGGACTGGGGGTCGAGCCTCATCTACATGCCACTGATGCGAAACATCACACGCCTCCTCATCGAACGAAACCCTTGGGACTACTTCGACGTAGGTGTACCCTACCCCACTGGATTCCACCCAAGGTCCGACGCCGACGTCCTCCAGTGGCAACACCACGTCCGCACACGTAACCGCACCACCCTCTTCTCCTTCGCCGGCGCGACACGCGGCGCAATTCGCAACGACTTCAGAGGCCTCCTGCTGAGACACTGCCTCAACGAGTCGGACTCGTGCCGAGTCGTGGACTGCGCAGGAACTCGTTGCTCCAACGGCACATCAGCGATTCTGGAGTCGTTCCTGGACTCCGACTTTTGTCTGCAGCCGAGAGGCGATAGCTTCACGCGCAGGTCAATTTTCGACTGCATGATCGCCGGCTCGATCCCGGTCTTTTTCTGGAGGCGAACCGCGTATTTCCAATACGAGTGGTTTTTACCGAGTGAACCGGGGAGTTACTCAGTGTTTATACACCGAAACGAAGTGAAAAACGGAACATCTATAAGAGGAGTTTTAGAGAGTTACAGTAGAGAAGAAGTAAGAAAAATGAGAGAAAAAGTGATTGATTATATACCGAAATTAGTGTATGCAAGACCCGATGCGGGTCTGGAGAGTTTCAAGGATGCTTTTGACGTTGCCATTGATGGGGTATTGAGGAGAATGAAGGAGCAAGAGGGAGGGTATAAGTGGTAG 1470 0.5354 MLPVSDNPSTELHKKPKTPLLFDRKSSFSSLQAYFSVYHPRTWLIFTILLLQVLLLFMARSLPISISIPRNRQHFPTPFTAPAVQVSGNPECAFGKVYVYDLPSFFNRELVKNCDKLNPWSSRCDTLTNDGFGQRATGLAGVVPEDLMPAWYWTDQFVTEIIFHNRILKHPCRTFEPESATAYFIPFYAGLAVGKYLWSNCSRQDRDRHGEMLLTWVRDQPYWNRSNGWDHFITLGRITWDFRRSKDEDWGSSLIYMPLMRNITRLLIERNPWDYFDVGVPYPTGFHPRSDADVLQWQHHVRTRNRTTLFSFAGATRGAIRNDFRGLLLRHCLNESDSCRVVDCAGTRCSNGTSAILESFLDSDFCLQPRGDSFTRRSIFDCMIAGSIPVFFWRRTAYFQYEWFLPSEPGSYSVFIHRNEVKNGTSIRGVLESYSREEVRKMREKVIDYIPKLVYARPDAGLESFKDAFDVAIDGVLRRMKEQEGGYKW* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0713 489 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 96 475 IPR004263 GO:0006486|GO:0016757
Vvi16g0713 489 Pfam Exostosin family 92 428 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0713 Vvi-Chr16 14530546 14532015 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0713 - - vvi:100263561 1019.61