Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0712 ATGGCATCGGTGAGCATGGTGGGAGCTGGGTTCTCATACAGCGCAAGACCATCGCCGTCAATGGAGGCACTGAAGAGTGGCAGAGGAGGAAGAAGCTTCGGCACCCAATTCCCCATCTCTTCCTCTGGTGCAGCGAGGAGAGCTGTGGTGGTGAGGGCAGAGACTATAAACCCAGAGATTAGGAAAATTGAAGAGAAAGTCGTTGACTCTGTTCTTGTCGCTGAGCTTGCCAAACCCGTCACTGCTTACTGCAGGTGTTGGAGGTCGGGGACTTTCCCACTCTGTGATGGAAGCCATGTGAAGCACAACAAAGCTACTGGAGATAACGTTGGGCCTTTGCTTTTGAAAAAGTAG 354 0.5198 MASVSMVGAGFSYSARPSPSMEALKSGRGGRSFGTQFPISSSGAARRAVVVRAETINPEIRKIEEKVVDSVLVAELAKPVTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0712 117 Gene3D - 72 117 IPR042216 -
Vvi16g0712 117 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 51 117 IPR045131 GO:0010506|GO:0051537
Vvi16g0712 117 SMART znf_cdgsh 66 105 IPR018967 GO:0043231|GO:0051537
Vvi16g0712 117 FunFam CDGSH iron-sulfur domain-containing protein 1 72 117 - -
Vvi16g0712 117 Pfam Iron-binding zinc finger CDGSH type 71 99 IPR018967 GO:0043231|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0712 K23882 - vvi:100263402 227.639