Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0709 ATGCTGTATTTCCAGCCTTTTTTTCATGATGGGATGAAAGAGTGGAGTTGTTGCAAGAAAAGGAGTCATGATTTCAGCTTATTTCTAGCAATTCCAGGATGTAAGACAGGTAAGCACACAACTGAGAAACCAGTACTAGCAAAGCCAGCTCCTCCAAAGAATCAAGTTCCTGCTCCAGCTCCTGCACCTGATGCATCGTCAAAACAAACTTGCTCTAGGTGTCAGCAGGGATTTTTTTGCTCAGAACATGGTTCACAAGCCAGAGAAAAGAGGTTGCAAACAGATTTGCCAGCCGAAAACAACACAGGTGTTCAGGAGGGCTTGGCTGCTCCTGCAAAGAAGATTGTTGATATAAACCAGCCACAAACCTGTGGAAACAAGGGATGTGGTATGACTTTCAAAGAAAAGGATAATCATGATACTGCTTGCAGTTATCATCCTGGGCCTGCAGTTTTCCATGACCGGCTAAGAGGGTGGAAATGCTGCGACATTCATGTGAAGGAGTTCGATGAATTCATGAGTATACCACCTTGCACCAAGGGATGGCACAATGCTAACCCAGCGTCATAA 570 0.4474 MLYFQPFFHDGMKEWSCCKKRSHDFSLFLAIPGCKTGKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRLQTDLPAENNTGVQEGLAAPAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHPGPAVFHDRLRGWKCCDIHVKEFDEFMSIPPCTKGWHNANPAS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0709 189 Gene3D - 3 43 - -
Vvi16g0709 189 Gene3D - 115 186 - -
Vvi16g0709 189 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 5 188 IPR043316 -
Vvi16g0709 189 MobiDBLite consensus disorder prediction 40 66 - -
Vvi16g0709 189 Pfam CHORD 123 183 IPR007051 -
Vvi16g0709 189 Pfam CHORD 5 39 IPR007051 -
Vvi16g0709 189 FunFam Cysteine and histidine-rich domain-containing protein RAR1 115 186 - -
Vvi16g0709 189 ProSiteProfiles CHORD domain profile. 1 39 IPR007051 -
Vvi16g0709 189 ProSiteProfiles CHORD domain profile. 124 183 IPR007051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0709 K13458 - vvi:100246439 395.971