Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0701 ATGGAGAGCTCAAAGCCTCACGCAATACTCCTAGCCAGCCCTGGTTTGGGTCACCTCATCCCCGTCCTAGAGCTCGCCAAACGCCTGGTAACCCATCATGGCTTCCGCGTTACTGTCTTCGCAATCGCTGCGTCTGCGTCACCTGCAGAATCCCAGTCTCTCGGTTCTGCTGCCAGTTCCAAGCTCCTACACGTAGTTGAACTTCCCCCAGCCGACATATCCAGCCTAGTTGATGCCGATGCAGCGGTCTTTACTCGGATTGTTGTCATGATGCGCGAGACCATACCGAGCTTCCGGGCAGCCATCTCCGCGATGAAGTTTCCTCCTTCGCTTATGATTGTAGACTTTTTTGGATTTGAAGCGCTTGAAATACCAGAATTTGATATGCCCAAGTACACTTTTGTGCCTTCAAATGCGTGTCTTCTGGCCCTGACGTTGTATGTGGCAACTCTAGATGTGGAGGTGAAAGGAGAGTATGTAGATAGAGCAGAACCGCTTCAGTTACCCGGTTGCAAACCTGTTCGGCCAGAAGATGTGGTTGATCCGATGCTGGATAGGAGGAATCAGCAGTACCTCGAGTACATGCGCATGGGAGTTGGGATCACTAAGGCTGACGGAATTCTGTTGAACACATGGGAGGATCTGGAACCCACTACGCTTAAAGCCCTAAGAGATCACAAGGTAATGGCCCAGTTCGCTAAGGTACCTATCTACCCCGTTGGTCCACTCACAAGGCCGGTCGGAAAAGAAGAAGCGAGGAGCGAGTTGTTGGATTGGCTAGACCTTCAACCCGCTGATTCGGTTATTTATGTATCTTTTGGGAGCGGTGGAACACACTCATCGGAGCAACTCGCGGAGTTGGCGTGGGGATTGGAGCTGAGCCAGCAAAGGTTCATTTGGGTGGTCCGCCCGCCCATCGAAAACGATCCATCAGGATCATTTTTCACAACAGGAAAGGGAAGGGGGGAGCACCCATCAGATTACTTGCCAGAAGGGTTCCTGACCCGGACCAAAAATGTGGGAGTGGTGGTGCCGCTGTGGGCACCACAAGTGGAGATCCTCAGCCATCCATCGGTGCGAGGATTTTTATCTCATTGCGGGTGGGGTTCCACATTGGAGAGCATACTCAGTGGGGTGCCGATGGTCGCATGGCCACTCTACGCAGAGCAACGATTGAATGCTACCATGCTGACGGAGGAGCTGGGAATTGCAGTCCGCCCGGAGGTGTTGCCGACAAAGAGGGTGGTGAGGAAGGAGGAGATAGAGAAGATGGTGAGAAAGGTTATGGAAGAGAATCATTCGAGGGAGAGGGTAAAAGAAGTGATGAACAGTGGAGAGAGAGCTTTAAGAAAGGGTGGGTCCTCCTATAACTCACTCTCACAAGCAGCTTCCACTGCAATTTCCTTTCATAAGAGTACAGGAGCCCCGTGA 1431 0.522 MESSKPHAILLASPGLGHLIPVLELAKRLVTHHGFRVTVFAIAASASPAESQSLGSAASSKLLHVVELPPADISSLVDADAAVFTRIVVMMRETIPSFRAAISAMKFPPSLMIVDFFGFEALEIPEFDMPKYTFVPSNACLLALTLYVATLDVEVKGEYVDRAEPLQLPGCKPVRPEDVVDPMLDRRNQQYLEYMRMGVGITKADGILLNTWEDLEPTTLKALRDHKVMAQFAKVPIYPVGPLTRPVGKEEARSELLDWLDLQPADSVIYVSFGSGGTHSSEQLAELAWGLELSQQRFIWVVRPPIENDPSGSFFTTGKGRGEHPSDYLPEGFLTRTKNVGVVVPLWAPQVEILSHPSVRGFLSHCGWGSTLESILSGVPMVAWPLYAEQRLNATMLTEELGIAVRPEVLPTKRVVRKEEIEKMVRKVMEENHSRERVKEVMNSGERALRKGGSSYNSLSQAASTAISFHKSTGAP* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0701 476 Gene3D Glycogen Phosphorylase B; 254 450 - -
Vvi16g0701 476 CDD GT1_Gtf-like 6 442 IPR002213 GO:0008194
Vvi16g0701 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 437 IPR002213 GO:0008194
Vvi16g0701 476 FunFam Glycosyltransferase 254 450 - -
Vvi16g0701 476 Gene3D Glycogen Phosphorylase B; 7 455 - -
Vvi16g0701 476 MobiDBLite consensus disorder prediction 440 459 - -
Vvi16g0701 476 FunFam Glycosyltransferase 7 245 - -
Vvi16g0701 476 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Vvi16g0701 476 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 1 468 - -
Vvi16g0701 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0701 Vvi-Chr16 14269762 14271192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0701 1 463 Glycosyltransferase AT3G50740 48.408 4.13e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0701 K12356 - vvi:100247997 945.266