Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0694 ATGAGTGTGGTTATGGGATTTATATTAAACAAAGCAATCTCTCTCTCTCTCTCTCTCGGGTTCTCTCTCTGGTTCTTTCTTATTAGAGTATTTGAAATGACCGCCATATCCCACAGTTTTGATGCAGTCCGAACTACAACACCCACCACCAAACTGGTGGTGAAAAAGTCCAGTGTTGGAGTCCTAGCCTTCGAGATTGCTGGCCTCATGTCCAAGCTCCTCCATCTCTGGCAATCTCTCTCTGATAAAAGCATAATTCGGGTCCGCAACGACGCTATATCTCTTGAAGGAGTTCGTAAAATCGTGTCCAATGACGAGGCCTTCCTTCTCGGCCTTGCATGCGCGGAAATGGTGGAGAATCTCAGGCATGTTGCCAAGTCCTTCTCCAGAATTAGCAAGCGGTGCGAGGATTTGAATCTCCGATCCTTCGAGCGTTTGTTTGACGAGTTTGCAAACTCGGGTTACGATCCTCATGGGTGGGTGTTGGGCTGGAAGGAGGTGGAAGGGAAGAACAAGAAAATGGATCGGTACGTGACCACCACGGCCAACCTTTATAGGGAGATGGACGAGCTCTCGATAATGGAGAATGGGTTGAGGAAGCTCTTACAGAGTACCGACCATGACGCTTCGATCAAAGAGCAAAAGGTGATTGATCTAGAGCAGAAGATTTTCTGGCAGAGACAGGAGGTAAAGTACCTAAAAGACAGATCTCTCTGGAACAGAAGCTTCGACACAGTTACTTCAATGCTGGCTCGATCAATCTTCACAGTTCTAGCAAGAATCAAGCTTGTTTTCGGAATCGGCCATGGATATCCAGCTTCTCTCCCTCGAAGTCTCTCAGCTTCTGCCACTGTCCACCCCTCTGAAAACCCTAGTTCCTGCAACTTCGTCTCCGGGCCATTGAAAAGCCCCAGACTAGAAGAAAAGAAAGACCACCATGCTCATACTTTCTTCGACCTGAATTCCAAGCTCCTAAAGCCACCTCCAACCACCTTAGGCGCCACTGCTCTAGCCTTACACTATGCCAACTTGATCATAGTGATAGAAAAGATGATAAAATCTCCTCAATTGGTGGGGGTGGATGCGCGGGACGATGTGTATGGCATGCTGCCGGATAGTATAAGATCATCCTTGAGGGCTAGATTGAAAGGAGTAGGGTTTTCGGCGAGTGATCCGGTGCTGGCCGGAGAGTGGAAGGATGCTTTGGGGAGGATTTTGGCGTGGTTGTCGCCATTAGCACATAACATGATAAAATGGCAAAGTGAAAGGAGCTTTGAGCAGCAGAATTTGGTGCAGAAGACCAATGTCCTTCTACTGCAGACACTGTACTTTGCAAATAAAGAGAAGACCGAAGCTGCCATAACTGAGCTGCTAGTGGGGCTCAACTACATTTGGAGGTTTGAGAGAGAGATGAACGCTAAGGCCTTGTTTGAATGCTCCAACATCAATGGGTCATTGTCGAATTTGCAGAATTCCAGCTGA 1482 0.4764 MSVVMGFILNKAISLSLSLGFSLWFFLIRVFEMTAISHSFDAVRTTTPTTKLVVKKSSVGVLAFEIAGLMSKLLHLWQSLSDKSIIRVRNDAISLEGVRKIVSNDEAFLLGLACAEMVENLRHVAKSFSRISKRCEDLNLRSFERLFDEFANSGYDPHGWVLGWKEVEGKNKKMDRYVTTTANLYREMDELSIMENGLRKLLQSTDHDASIKEQKVIDLEQKIFWQRQEVKYLKDRSLWNRSFDTVTSMLARSIFTVLARIKLVFGIGHGYPASLPRSLSASATVHPSENPSSCNFVSGPLKSPRLEEKKDHHAHTFFDLNSKLLKPPPTTLGATALALHYANLIIVIEKMIKSPQLVGVDARDDVYGMLPDSIRSSLRARLKGVGFSASDPVLAGEWKDALGRILAWLSPLAHNMIKWQSERSFEQQNLVQKTNVLLLQTLYFANKEKTEAAITELLVGLNYIWRFEREMNAKALFECSNINGSLSNLQNSS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0694 493 Pfam Domain of unknown function (DUF3475) 61 117 IPR021864 GO:0045927
Vvi16g0694 493 PANTHER BNAC09G50660D PROTEIN 54 480 - -
Vvi16g0694 493 Pfam Protein of unknown function (DUF668) 331 418 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0694 Vvi-Chr16 14225405 14227114 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0694 - - vvi:100256698 884.404