Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0690 ATGTTCAAAGCCATGACTTTGGCTTCACCAAGAGGGTTTCCGACAATGTCTGCCTTTCCCCGGTCTCTCTCCTCCATAGCAGTATCAGTGGGAGGATTGGCATTGTTCTTAATTTTTGCTTCTTGCCTTTTGCTCTCATACCCAATTGGTTCCACGGTCCGGGGCTATTTTTACGGTGATGATTCAGGAAAAATGGCATTGTGGGATAATGAAACTATAATTGATACTCGCCTGGTTGACAATGTAGATTTAGTTAATAAGAATCTGCCTGCCAATCCTAGTTCAAAAGTGCCCATAAGTTCTTCTGGTCAATTGATTGATTCTGGGACTGATGGACTGGTGAATGAGCCAGCAAAGGTTCCCCTGTCATCTTCTAATATAACACAAGAAGAGGAGATCAGTAGTTACGTTTCCTCCAATATTGCAGATAATGTGGAAATTGCTAGCCCTCTTTCCATGGCTTTAAAGAATAATTCTGATGTTACAGTTGCAGGATCAAATCCTACCAGTCCAGCTTCTCCTTCTTTGCCTGAGGATGTAGGGACTAGTTTGGTCGATTCAGGGTGTGATCTGTACCATGGGAGTTGGTTTTATGATTCATCTGGACCATCATACACAAACAACACATGCCCTGTTTTGACACAGATGCAAAATTGCCAGGGAAATGGGCGACCTGACAAGGAATATGAGAACTGGAGATGGAAACCCTCTCAGTGTGACCTCCCAAAATTTGATGCCAAGAAATTCCTCGAGTTGATGAGGGGAAAGACACTGGCTTTCATTGGTGACTCTGTTGCTAGAAACCAAATGGAATCGATGCTGTGCCTTCTATGGCAGGTAGAAGTTCCAAAAAATCGGGGGAATCGAAAAATGCAACGCTGGCACTTTAAGTCGACATCTGTAATGATTGTCCGGATATGGTCCTCATGGCTCGTCCATCAAACAACTGAGCCGCTTGATTTTGCTCCTGAGGGTGTGGTCAAGCTCCACCTTGATATCCCTGATAACGTCTTCATGGAGCACATCCCAAAATTTGACGTGGTTGTGCTTTCTTCAGGCCATTGGTTTGCTAAGCAATCGGTTTATGTCCTGAAAAATGAGATTGTTGGAGGACAATTGTGGTGGCCGGACAAATCTCGCTCAATGAAGATTAACAACATTGAAGCATTTGGGATATCCGTGGAGACAAGTCTCGCTGCCTTAGTTACACATCCTAATTATACGGGTCTAACCATCGTGCGGTCCTTCTCGCCTGATCACTATGAAGGCGGTGCCTGGAATACAGGTGGATCATGCACTGGGAAGGTAAGACCTGCCTCAGCGGGCGACTTAGTTGAAAATGGCTTTACAAATATAATGCATGAGAAGCAGGTGATGGGTTTCGACCGTGCCATCAAGAAGGCCACTAACAAATCAAAATTGAGGTTGATGGATATCACGGAAGCATTTGGGTACCGCCATGATGGGCATCCAGGTCCATATAGGAGCCCCGATCCAAACAAGATCACACAGCGTGGCCCTGATGGGAAGCCCCCACCACAGGATTGCTTACACTGGTGCATGCCAGGTCCAGTCGATACATGGAACGAGTTTGTGCTCGAAACCATAAGAAGAGAATTCAATGGTAAGGAAAGCTTTCCTTCATGA 1647 0.4542 MFKAMTLASPRGFPTMSAFPRSLSSIAVSVGGLALFLIFASCLLLSYPIGSTVRGYFYGDDSGKMALWDNETIIDTRLVDNVDLVNKNLPANPSSKVPISSSGQLIDSGTDGLVNEPAKVPLSSSNITQEEEISSYVSSNIADNVEIASPLSMALKNNSDVTVAGSNPTSPASPSLPEDVGTSLVDSGCDLYHGSWFYDSSGPSYTNNTCPVLTQMQNCQGNGRPDKEYENWRWKPSQCDLPKFDAKKFLELMRGKTLAFIGDSVARNQMESMLCLLWQVEVPKNRGNRKMQRWHFKSTSVMIVRIWSSWLVHQTTEPLDFAPEGVVKLHLDIPDNVFMEHIPKFDVVVLSSGHWFAKQSVYVLKNEIVGGQLWWPDKSRSMKINNIEAFGISVETSLAALVTHPNYTGLTIVRSFSPDHYEGGAWNTGGSCTGKVRPASAGDLVENGFTNIMHEKQVMGFDRAIKKATNKSKLRLMDITEAFGYRHDGHPGPYRSPDPNKITQRGPDGKPPPQDCLHWCMPGPVDTWNEFVLETIRREFNGKESFPS* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0690 548 MobiDBLite consensus disorder prediction 487 514 - -
Vvi16g0690 548 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 241 534 IPR026057 GO:0016740
Vvi16g0690 548 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 136 532 IPR029962 GO:0016413
Vvi16g0690 548 Pfam PMR5 N terminal Domain 188 240 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0690 Vvi-Chr16 14030006 14035469 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0690 - - vvi:100244660 1134.78