Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0689 ATGTCTAATGTCCAAAGTGATCCGCTCCTACAAGTTGAAACAACATGTGGATCTCTTCTATATGAGCTTCAGATAATATGGGATGAAGTTGGGGAGTCTGATACTGATAGGGATAAAATGCTGCTTGAACTTGAACGAGAGTGTCTAGAAGTTTATAGGAGAAAGGTAGATCAGGCAAACCGATGTAGAGCTCAGCTACGACAGGCAATTGCTGATTCTGAAGCAGAGCTTGCTGCCATATGTTCTGCCATGGGGGAGCGACCAGTGCATATCAGGCAGTCTGATCAAAATGCTGGAAGTTTGAAAGAGGAGCTCAAGGCCATTATTCCACAACTGGAAGAGATGCACAAACGGAAAAGTGAGAGAAGGAATCAATTTTTTGAAGTTGTGGAGGAAATAGAGAAGATAAAAAGTGAAATCTATAGTTCCACAGAGTACATTGCTTCCAAGACAGTTGTAGATGACACTGACCTGTCTTTAAGAAAGCTTGAGGAATTGCACAAACAGCTTCAGGCACTTCAAAAAGAGAAGAGTGATCGCTTAAAGCAGGTTCTCGACCACCTGAGTACTTTGAACTCTCTTTGTTTGGTCCTTGGTATGGATTTCCAGCAAACAGTTAATGAGGTTCATCCCAGTTTAGGTGATTCTGATGGAAGAAAGAACATAAGTAATGCCACAATTGAGCAGTTGGCAGCTGCAATAAAGACCTTGCGAGGGGTTAAAATACAGAGAATGCAGAGGCTCCAAGATCTTGCATCTTCCATGTTGGAGCTATGGAATTTGATGGATACACCAATTGAAGAGCAACAGTTGTTTCAGAACGTTACTTGTAATATTGCTGCTTCAGAACATGAGATAAATGAGCCCAACACACTCTCTGTGGACTTCATTAATTATGTAGAGGCAGAAGTTTCTAGGCTGGAAGAGCTGAAAGCAAGCAAAATGAAAGAGCTTGTTTTAAAGAAGAGGTCAGAACTAGAGGAGATCTGTAGGAAGACACATATGATCCCAGAAGCAGATAGTGCGCTGGATTATGTTATTGAAGCTATGGAGTCTGGAGCTGTGGATGCTTCTTGTGTCCTTGAACAAATTGAACTTCAAGTTGCAAAGGTTAAAGAGGAAGCTTTTAGCAGGAAAGAAATACTTGAAAAAGTTGATAAATGGTTGGCTGCATGTGAGGAGGAGAGTTGGCTTGAGGAATATAATAGGGATGACAACCGATATAATGCTGGTAGAGGCGCTCATCTTACTCTCAAGCGTGCTGAGAAAGCTCGTTCTTTGGTTAATAAACTTCCAGCAATGGTGGATGCATTGGCTTCAAAAACTGTGGCATGGGAGAAGGAGAGAGGTGTTGAGTTCACATATGATGGGATTCGTCTTCTTTCTATGCTTGAAGAGTATACTTTTCTACGGCAAGAGAAAGAGGAAGAACGCCGAAGGCAGAGGGACCAGAAGAAACTTCAGGGGCAGCTAATAGCTGAACAAGAGGCACTTTTTGGGTCAAAACCAAGTCCTTCAAAGCCACAGAGTGTTAAAAAGGCTTCTAGAGTTTCAACTGGAAGCACAGGCAGCAGAAGACTCTCTGTTGGAGGAGCAATGATTCAAACTCCCAAACCTGATCCAATTCACTCTACAAAAGCCACCCCTAGGCCAGGCAAGAAGAGTGATCGTTACCAAATTGACCAAGTAAGACATTGCCAGGATGATGGGTTTACAGCATTATCAGCTGGTACTAGAGGTTTGGACATTGCAGGGCTCCCCATAAAAAAGCAATCCTTCAATCCACGTGAAATAGACTCACCCATGATGCGAAAACCCTTCTCGCCAATATCTTCCACAGCATCATCAGAAGCCAACACCATGTTAGAAGATCTCAACAGACCTCAGCCCAAGATACTGCACAAGACAGTGTCTAGTAACAACATCCCCTACACAACTCCCTCCAAATCACAACTACCACCACCTTCTGCCACAGATGAAGAGAACAGGACCCCAAAGACAATGCCAATTCCTGTCCCCTCCACACCTTCAACTGTATCAGTGCCAATGCTGACAGCCATGACCCCTGCTCCCCCTCCAGCCCCGGTCCCTTACAATGCTAATCCAGTAGAAGAGACCGAGTACTCATTTGAGGAAAGAAGAGCTGGTTTTGTGCTGCCCCAGGCACATCTAAAGACTGCAATACAAGTTTGA 2193 0.4387 MSNVQSDPLLQVETTCGSLLYELQIIWDEVGESDTDRDKMLLELERECLEVYRRKVDQANRCRAQLRQAIADSEAELAAICSAMGERPVHIRQSDQNAGSLKEELKAIIPQLEEMHKRKSERRNQFFEVVEEIEKIKSEIYSSTEYIASKTVVDDTDLSLRKLEELHKQLQALQKEKSDRLKQVLDHLSTLNSLCLVLGMDFQQTVNEVHPSLGDSDGRKNISNATIEQLAAAIKTLRGVKIQRMQRLQDLASSMLELWNLMDTPIEEQQLFQNVTCNIAASEHEINEPNTLSVDFINYVEAEVSRLEELKASKMKELVLKKRSELEEICRKTHMIPEADSALDYVIEAMESGAVDASCVLEQIELQVAKVKEEAFSRKEILEKVDKWLAACEEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARSLVNKLPAMVDALASKTVAWEKERGVEFTYDGIRLLSMLEEYTFLRQEKEEERRRQRDQKKLQGQLIAEQEALFGSKPSPSKPQSVKKASRVSTGSTGSRRLSVGGAMIQTPKPDPIHSTKATPRPGKKSDRYQIDQVRHCQDDGFTALSAGTRGLDIAGLPIKKQSFNPREIDSPMMRKPFSPISSTASSEANTMLEDLNRPQPKILHKTVSSNNIPYTTPSKSQLPPPSATDEENRTPKTMPIPVPSTPSTVSVPMLTAMTPAPPPAPVPYNANPVEETEYSFEERRAGFVLPQAHLKTAIQV* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0689 730 MobiDBLite consensus disorder prediction 638 663 - -
Vvi16g0689 730 Coils Coil 153 183 - -
Vvi16g0689 730 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 509 - -
Vvi16g0689 730 MobiDBLite consensus disorder prediction 502 529 - -
Vvi16g0689 730 Coils Coil 102 122 - -
Vvi16g0689 730 MobiDBLite consensus disorder prediction 495 557 - -
Vvi16g0689 730 Coils Coil 49 76 - -
Vvi16g0689 730 Gene3D - 367 501 - -
Vvi16g0689 730 Coils Coil 460 484 - -
Vvi16g0689 730 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Vvi16g0689 730 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 589 IPR007145 GO:0000226|GO:0008017
Vvi16g0689 730 MobiDBLite consensus disorder prediction 638 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0689 Vvi-Chr16 14017550 14021677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0689 11 548 EF-hand Containing Proteins AT5G62250 57.326 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0689 K16732 - vvi:100244670 1325.46