Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0682 ATGGCCACTCCCAATTCCACCCCCATTGATTCCTCTTCGGGTGACGAAGCTGCAGCCAAGGCCATGCACAAGCGTTACGAAGGTTTGGTCACTGTTCGGACCAAGGCTATCAAGGGCAAAGGAGCTTGGTACTGGGCTCATCTTGAACCCATTTTGGTGCCTAATCCCGACACTGGTCTGCCCAAGGCGGTTAAGCTCAAGTGTTCTTTGTGTGAAGCCGTGTTTTCAGCGTCCAATCCATCGAGGACTGCTTCCGAGCATCTGAAACGCGGCACTTGCCCCAATTTCAGCTCCGCTTTGAGGCCCATTTCGACGGTATCGCCTTCTTTAGCTCTGCCTCCTTCGCATAATCATAGAAAAAGGAGTGCCCATATGGGTGCTCCCTCTTCATCGTACCATGTTAGTTCGCTGGCTATGGTTGATTCTCCCCGCTTCTGCGGAGAATTGGGGTACTCTTCGCCGCCACCGGTGCAAAACCCAGTTGGGAGTGGTGGGGAAAAGGTGTTATCACACCATCAGTTAGTGTTATCCGGTGGGAAGGAGGATTTAGGTGCATTGGCAATGTTGGAAGATAGTGTGAAGAGGCTTAAGAGTCCTAAGGCTTCGCCGGGACCAGAATTAAGCAAGGAACAAATCAATTCTGCGCTTGAATTGCTTGCGGATTGGTTCTATGAGTCTTGTGGCTCAGTTTCATTTTCGAGCCTCGAGCACCCAAAGTTCCAGGCTTTTCTTAACCAAGTCGGGTTGCCCTCTGTCTCTAGGAGGGAGTTTTCGGGGGCACGGCTTGATACAAAGTTTGACGAGGCCAAGATTGAGTCTGAAGCCAGAATTAGAGATGCCATGTTTTTTCAAGTTGCTTCTGATGGGTGGAACAGCAAGAATTTTGGTTTTTCTTCAGGGGAAGAGAATTTGGTTAAGTTTACAGTTAATCTTCCGAATGGGACTAGTGTGTTTCAGAAGGCGGTGTTCACTGGCGGATCAGTGCCATCTAAGCATGCAGAGGAGATATTGTGGGAGACGATCACTGGTATATGTGGGAGTGTTGTGCAGAGGTGTGTAGGGATAGTTGCGGATAAGTATAAGGCCAAAGCATTGAGGAATTTGGAGATTCAGAATCATTGGATGGTTAATCTCTCTTGCCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAGCAAAGAGCTTCCACTTTTCAGCATTGTCACTGAAAAGTGCTTGAAGCTTGCGAATTTTATCAATATCAAGTCTCAAGTTAGGCATAGTTTCCACAAGTTCCAATTACAGGAGCTTGATCATGTTGGGTTGCTTCGAGTTCCCCCTTCCAAATGCGATAACATGAAGAATTTTGTGCATGTTTATGCAATGTTGGAGGATATAATGAGCAACGCCCAGGTACTACAATTGGTTGTGATGGATGAATCATATAAGGTGATATGTGTAGAGGATCCAGCTGCAAGGGAAGTAGCAGATATGATTCAAGATGTGCGGTTTTGGAATGAGCTCGATGCAGTTCATTCGCTAGTAAAGCTTATTAGAGAAATGGCTCAAGAGATTGAGGTTGAGAGACCTTTAGTTGGGCAATGTCTTCCTCTTTGGGAGGAGCTGAGAACAAAAGTAAGGGAATGGTGCGTGAAATTTAACATCGATGAGGAGCCTGTTGAGAAGATAGTTGAAAAGCGGTTCAGAAAAAACTACCATCCGGCCTGGTCAGCTGCATTTATACTTGACCCCTTTTACTTGATGAGGGATACGAGTGGGAAATATCTTCCACCATTCAAGTGCTTGACACATGAACAGGAGAAGGATGTGGATAAGCTCATAACCCGTCTGGTTACAAGGGAGGAAGCTCATATTGCATTGATGGAACTTATGAAATGGAGGTCGGAAGGGCTTGACCCACTTTATGCACAGGCTGTTCAGGTTAAACAGCAAGACCCTGTGACAGGAAAGATGAAAATTGCCAACCCTCAGAGCAGTAGACTTGTGTGGGAAACTTGTCTGAAAGATTTTAAGTCATTGGGAAAGGTTGCTGTGAGGCTCATCTTCCTCCATGCAACAGCGTGTGGGTTTAAGTGTAATTGGTCTTTCATGAGATGGGTTTGTGTCCATGGTCACTCCAGGGTGGGCCTAGACAGGGCTCAGAAGATGATATTCATTGCAGCTCATGCTAAGCTTGAGAGACGGGATTTCTCTAGTGAGGAAGAAAAGGATGCAGAACTGTTTGCCATGGCAAATGGTGAGAGTGACATGCTCAATGAGGTCTTTGCTGATGCACCCTCAGTGTAA 2289 0.4635 MATPNSTPIDSSSGDEAAAKAMHKRYEGLVTVRTKAIKGKGAWYWAHLEPILVPNPDTGLPKAVKLKCSLCEAVFSASNPSRTASEHLKRGTCPNFSSALRPISTVSPSLALPPSHNHRKRSAHMGAPSSSYHVSSLAMVDSPRFCGELGYSSPPPVQNPVGSGGEKVLSHHQLVLSGGKEDLGALAMLEDSVKRLKSPKASPGPELSKEQINSALELLADWFYESCGSVSFSSLEHPKFQAFLNQVGLPSVSRREFSGARLDTKFDEAKIESEARIRDAMFFQVASDGWNSKNFGFSSGEENLVKFTVNLPNGTSVFQKAVFTGGSVPSKHAEEILWETITGICGSVVQRCVGIVADKYKAKALRNLEIQNHWMVNLSCQLQGFISLIKDFSKELPLFSIVTEKCLKLANFINIKSQVRHSFHKFQLQELDHVGLLRVPPSKCDNMKNFVHVYAMLEDIMSNAQVLQLVVMDESYKVICVEDPAAREVADMIQDVRFWNELDAVHSLVKLIREMAQEIEVERPLVGQCLPLWEELRTKVREWCVKFNIDEEPVEKIVEKRFRKNYHPAWSAAFILDPFYLMRDTSGKYLPPFKCLTHEQEKDVDKLITRLVTREEAHIALMELMKWRSEGLDPLYAQAVQVKQQDPVTGKMKIANPQSSRLVWETCLKDFKSLGKVAVRLIFLHATACGFKCNWSFMRWVCVHGHSRVGLDRAQKMIFIAAHAKLERRDFSSEEEKDAELFAMANGESDMLNEVFADAPSV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0682 762 PANTHER OSJNBA0013A04.12 PROTEIN 23 728 - -
Vvi16g0682 762 MobiDBLite consensus disorder prediction 107 128 - -
Vvi16g0682 762 SUPERFAMILY Ribonuclease H-like 322 727 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0682 Vvi-Chr16 13851275 13853563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0682 - - vvi:100266895 1510.74