Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0677 ATGGGGAACCTGTGTTGTATGGCGTGTGTAGACCAAGCCAGCATAGGGGTGGTGGAGAGATGGGGTCGCTTCGACAAATTGGCTCAGCCTGGCTTCCACTTCTTCAATCCTTTAGCCGGTGAGTGTCTCGCCGGCCTTTTGTCCACCCGGATCAGTTCTCTCGATGTCCGCATCGAAACCAAGACCAAGGACAATGTATTTGTTCAAATGCTTTGCTCAATCCAATATCGTGTGATTAAAGAAAATGCGGATGATGCCTTTTATGAGTTACAGAACCCCAAAGAGCAGATTCAGGCTTTTGTGTTTGATGTGGTTCGAGCTCATGTTCCAAGAATGACTTTGGATGAGCTGTTTGAACAAAAGGGTGATGTTGCTCAAACCGTCTTGGAGGAGCTTGAGAAGGTGATGGGAGCTTACGGATATAACATAGAGCACATACTGATGGTTGATATTATACCTGATGCTTCTGTACGCAAGGCAATGAATGAGATAAATGCAGCATGCATGAGTCATGTGACCGCACCTGCAACTGTACTACACAGCATTATTTTTGTCTTACAGCTCAAAGGCTTCAGCTTGCTAATGTATACAAGGGAGAGGCTGAAAAGATCCTCCAAGTTAAGAAGGCAGAGGCTGAAGCTGAAGCCAAGTACCTAG 657 0.4597 MGNLCCMACVDQASIGVVERWGRFDKLAQPGFHFFNPLAGECLAGLLSTRISSLDVRIETKTKDNVFVQMLCSIQYRVIKENADDAFYELQNPKEQIQAFVFDVVRAHVPRMTLDELFEQKGDVAQTVLEELEKVMGAYGYNIEHILMVDIIPDASVRKAMNEINAACMSHVTAPATVLHSIIFVLQLKGFSLLMYTRERLKRSSKLRRQRLKLKPST* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0677 218 Pfam SPFH domain / Band 7 family 10 167 IPR001107 -
Vvi16g0677 218 SMART PHB_4 5 165 IPR001107 -
Vvi16g0677 218 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 5 166 - -
Vvi16g0677 218 Gene3D Band 7 domain 45 167 IPR036013 -
Vvi16g0677 218 SUPERFAMILY Band 7/SPFH domain 46 166 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0677 Vvi-Chr16 13779285 13784833 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0677 - - vvi:100260043 337.035