Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0671 ATGGCTTGTTGGTCTGCTGAGAATGCCACCAAAGCCTACCTTAGCACCTTGAAGATGGGACATAGAGCTAAAGAGCCAGATGTAGCCGAGTTTATTTCAGCCCTAGCTGCAGGCAACAATGCCCAACTTATGGTTGTTGCCTGCGCCAGTGTTACCAGCTCCACCGCCCTAGCCCTAGCGGCCGCGGCTCATCAAACCGGTGGCCGTGTCGTTTGCATCCTCCGGGGGCTCGAAGAGCTACACTCATCCAAAATGCTGTTAGGCCTTGATGCATGTCACATTGAGTTTGTTGTTGGGGAAGCTCAGACTCTCCTATTAAATGACTACATGGAAGCCGATTTCGTCCTCATCGATTGCAATCTTGAGAACCATGAAGGGATCCTGAGAGCGGTCCAAGCCGGTGGGAAGCCTAATGGGGCTGTTGTTATTGGATATAATGCATTTGGAAAGGGGACATGGAGGGTGAACGGATCAAAAACTCAGCTGTTGCCGATTGGAGAAGGGTTGCTGGTAACCAGAATAGGTGCCAAGGCAAAGGTTAATGGTAGCTGTGGTGGGGTTGGGAAGAGGAGTCATTGGGTTGTCAAAGTAGATAAATGCACAGGTGAAGAACATGTGTTCAGGGTCAGATTTCCACAAGGGAAACGAATAGAAGCTTAG 660 0.5 MACWSAENATKAYLSTLKMGHRAKEPDVAEFISALAAGNNAQLMVVACASVTSSTALALAAAAHQTGGRVVCILRGLEELHSSKMLLGLDACHIEFVVGEAQTLLLNDYMEADFVLIDCNLENHEGILRAVQAGGKPNGAVVIGYNAFGKGTWRVNGSKTQLLPIGEGLLVTRIGAKAKVNGSCGGVGKRSHWVVKVDKCTGEEHVFRVRFPQGKRIEA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0671 219 Gene3D Vaccinia Virus protein VP39 5 174 IPR029063 -
Vvi16g0671 219 PANTHER DUF1442 FAMILY PROTEIN 3 208 IPR009902 -
Vvi16g0671 219 Pfam Protein of unknown function (DUF1442) 3 208 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0671 Vvi-Chr16 13715872 13716626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0671 - - vvi:100265251 417.157