Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0666 ATGGTGGTTGGTCTCAGAAACTTCACCGAGAGGGTCGGCGATGGCGCCGGACAACCAGTGCTCAACGCCGACAACGGCGAGGAGCTCATGCACGTCGAGTCTGGTGTAGCCATTGTTCTCGGAAACCATCCTCCTGAGTCCCCCGGGACTCTCTTCATTTCCACCAAGCAAGTGATATGGTTGAGTGACGTAGACAGGGCCAAAGGGTATGCGGTTGATTTCTTGTCAGTGTCACTGCATGCGGTTTCAAGGGACCCGGAGGCTTACTCTTCCCCTTGTATATATACTCAGATTGAGACTGAAGAGAATGATGCTGATTCCGAGGGCTCAGATTCAGAATGTGATGGAACTCTAGACTTATCAAAGATTACAGAGATGAGGCTTGTCCCATCTGACCCTAGCCAATTGGAAACTCTGTTTGAGATGTTTTGTGGATGTGCTGAGCTAAATCCGGAACCTAATGACGAGGAAGAAGAAGAGCACAACTGGATTTTTAGTGCTGATCAGATGGAAGATGATGCCACTGGGGAAGACAATTCTGAATGGCATTTTGCTCACAACCCTTCTCACTCAATTGGTCAATCAAATGGGCATCATGATCTAGCTCAACCCATGCTTGAGCTTCAAATAAGCGATGAACGGTTTGAGGATGCAGAAGAGATGGAACGCAACAGTGGCAGTGGCCATACCTGA 693 0.4863 MVVGLRNFTERVGDGAGQPVLNADNGEELMHVESGVAIVLGNHPPESPGTLFISTKQVIWLSDVDRAKGYAVDFLSVSLHAVSRDPEAYSSPCIYTQIETEENDADSEGSDSECDGTLDLSKITEMRLVPSDPSQLETLFEMFCGCAELNPEPNDEEEEEHNWIFSADQMEDDATGEDNSEWHFAHNPSHSIGQSNGHHDLAQPMLELQISDERFEDAEEMERNSGSGHT* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0666 230 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 69 83 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vvi16g0666 230 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 46 61 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vvi16g0666 230 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 121 133 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vvi16g0666 230 Gene3D - 21 158 IPR011993 -
Vvi16g0666 230 PANTHER CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN 1 223 IPR039924 -
Vvi16g0666 230 Pfam Regulator of volume decrease after cellular swelling 49 171 IPR039924 -
Vvi16g0666 230 MobiDBLite consensus disorder prediction 210 230 - -
Vvi16g0666 230 MobiDBLite consensus disorder prediction 172 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0666 K05019 - vvi:100248089 457.603