Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0653 ATGGTCATCAATAGAGATAAACCACTCAAGAGATATCATGTTGGTATAATTCAGGCAATGTTAATACCCCCAAATGTAGAACTAGTTTTTGGCATAGAAGCAAGTGGCGAGAACTTGATTGATACAACAAAAGTTAATACAAGGTTGCCAATGTTGGTTTATGTATTTTGTGAGAATAGGTCAGACTATGATTATAAGAAGAAAGTCAAAGCCACGAATGCTTTAGTCCAAACTAATACAATTATGTCAAATAGGTCGTCTATTCTAAATCTTGATCGTGATCACTATACCCAAATTATAATATGTTGTGGTTTAATTTCAATTTTAGAAATTACAAGCACATGTATCATGATTGTTGTTTATGTTTCACATCAATATTATATACCAAAGAATTGA 396 0.3131 MVINRDKPLKRYHVGIIQAMLIPPNVELVFGIEASGENLIDTTKVNTRLPMLVYVFCENRSDYDYKKKVKATNALVQTNTIMSNRSSILNLDRDHYTQIIICCGLISILEITSTCIMIVVYVSHQYYIPKN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0653 131 Pfam Cellulose synthase 10 97 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi16g0653 131 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 11 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0653 Vvi-Chr16 13389627 13390119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0653 13 96 Glycosyltransferase AT5G16910 53.571 2.04e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0653 K00770 - vvi:104882129 122.094