Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0647 ATGCTTGAATGGACATCACGGTCCATTCAAACCCTAGCTCTCATGTCGCTTCTAACTTTCCCTCGCTTTCTCTCCTTTTCCTTCTCTCCAAACACCCTCTCTTTTGGCAGACCTCGGTCACGGTTTCCATTGGCAGCAAGCAAGGGAGCGGAATCGAGTGCGATAGACGACAGCGTGGCTGTTCTGTGGTTCAAGCACGACCTCCGTATCGATGATCATCCCGGACTCGTGGCGGCGGCGTCTCGGCACCGGACGGTCATTCCTCTCTACGTCTTCGATCGGCGGATTCTTTCTCGTTTTTCTGATGAAATGCTGGAACTGGTTCTTGTTGCCATGGAAGACTTGAGAGAGTCGCTGAAGGATCAGGGGTCTAATCTGATGATCAGGTTCGGGAGTGCAGAAAAAACCATACGAGAAATTGTAAAAGAGGTGAAGGCTACCACCATATTTGCTGAAGAGGAGGTAGAGCACGAGCTGAGAAAGATGATAGATACTGTGCAAGAGACTTTAGCAACAGCCCCACTTCTAGAGAGGAGCCCAGAGGTTGTCATGTGGCACACTCCATTTTATGATATTAAGGACTTGAAGTACCTGCCTCCATTACACCATGACTTCAAGAAGCTTCAACTGCCTATAACCTCACCTCTTGGGCCCCCAAGATTACCTTCTGTAGAAATTGGATTGGACTGGGGTCCTGTACCCTCTCTTGCTGATTTAAAACAATTTGTGAATGGAAATCCAAGCAAATCAAAAGAGGATTGGACTTCAATTAAGGAGACCATAGCTGAAAAAATGTTGCTGAATGATCAGATAGATCAGGCTGAGCCCCCAAATACTCTGATTGGAGGAATGGAATCATTGAAGTCAAGAGGAAGCAACCGGATCAATTTAAATCATGAACAAACCCAGAGAAAGAGATTGCAAAAATCTGTTTTTGTCACAAGCAATGGGAATTTAGTGGGAGGTGGGACAAATGCTGTATTGAATGCATTAGCTGCATATTTGAGATATTTGGAGGGAACTGGCCGAGATGACTGGCAGGAGGTACATGAAAAGTTACGCAATGCTGAAAGTCGGGATGGAGCTTCATTTGGCATTCTCTTTGGCTCTGCCCTTTTTCTTGGCATCATATCAAGAAGGAGAGTTTACCATGAAGCTATCAAATATGAGAAAGAAAGAAATGCTGGATTTCTATCTCCTTTTGGATATTCAGCGGCCACTATTGCGGCAGCAGCTGATGCTGTATGCACAATGGAGTGGTACTGGCTTATGGCTCTTAAAAGTCAAATCAGTGATGAAGGACCGTTTTCTATTCGAATATGGAGATGGAATGGCTATCTAATTCAGTATACAGTTGTTGGTCATGAAGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCTTTCTTTGAGCACTACCGAGACAATATACATCCTGTAGCTGACAGCGGAAAGCGAGTTTGGGCCATTACTCTTTTAGGGTTTGGCAAATCAGAAAAGCCAAATGTTTTTTACTCTGAACTCATGTGGGCTGAACTGCTGAGAGATTTCATCATTCAGGTTGTGGGTGAACCAGTACATCTTGTTGGGAACTCGATTGGTGGCTACTTTATTTCTATTGTTGCCGGTCTTTGGCCTGCTTTGGCCAAGTCTGTCATCCTTATCAACAGTGCTGGCAATGTTATTCCTGAATATTCTTCTGTGCCATCTTCTAAAGAAAGGAGAACTTCAGGAGCTGCATGGTTGGGTGCAAGACTCCTTTTGCCCTTCTTGAGATTGAGACTCCCAAGCATAGTAAAAAACTGCTACCCTGCTAAAATGGCAAGAGCTGATGATTGGCTTCTTAATGAAATGCTACGATCATCATATGACCCTGGTGTGCTTGTGGTTCTGGAAAGTATTTTCAGTTTCAATCTCTCAATTCCTCTTAATTATCTCTTAAAAGGATTCAATGAAAAGGTTCTATTCATACAGGGAGTGAAAGATCCTATATCCGACTCAGAGTCAAAATTGGCTATGCTTAGAGAGCATTTTGCTGGAATCGCGATCAAGGAATTGAGTGCAGGACACTGCCCCCATGATGAGCTGCCAGAAGAAGTAAATTACATTATCTGTGACTGGATAGCTACTATTGAAAGTAAGCTTCTTCTAGTTTAG 2157 0.44 MLEWTSRSIQTLALMSLLTFPRFLSFSFSPNTLSFGRPRSRFPLAASKGAESSAIDDSVAVLWFKHDLRIDDHPGLVAAASRHRTVIPLYVFDRRILSRFSDEMLELVLVAMEDLRESLKDQGSNLMIRFGSAEKTIREIVKEVKATTIFAEEEVEHELRKMIDTVQETLATAPLLERSPEVVMWHTPFYDIKDLKYLPPLHHDFKKLQLPITSPLGPPRLPSVEIGLDWGPVPSLADLKQFVNGNPSKSKEDWTSIKETIAEKMLLNDQIDQAEPPNTLIGGMESLKSRGSNRINLNHEQTQRKRLQKSVFVTSNGNLVGGGTNAVLNALAAYLRYLEGTGRDDWQEVHEKLRNAESRDGASFGILFGSALFLGIISRRRVYHEAIKYEKERNAGFLSPFGYSAATIAAAADAVCTMEWYWLMALKSQISDEGPFSIRIWRWNGYLIQYTVVGHEGPAVLLVHGFGAFFEHYRDNIHPVADSGKRVWAITLLGFGKSEKPNVFYSELMWAELLRDFIIQVVGEPVHLVGNSIGGYFISIVAGLWPALAKSVILINSAGNVIPEYSSVPSSKERRTSGAAWLGARLLLPFLRLRLPSIVKNCYPAKMARADDWLLNEMLRSSYDPGVLVVLESIFSFNLSIPLNYLLKGFNEKVLFIQGVKDPISDSESKLAMLREHFAGIAIKELSAGHCPHDELPEEVNYIICDWIATIESKLLLV* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0647 718 Gene3D alpha/beta hydrolase 428 711 IPR029058 -
Vvi16g0647 718 Gene3D HUPs 39 195 IPR014729 -
Vvi16g0647 718 PANTHER DNA PHOTOLYASE 28 715 - -
Vvi16g0647 718 Pfam DNA photolyase 60 172 IPR006050 -
Vvi16g0647 718 Pfam Alpha/beta hydrolase family 460 700 IPR000073 -
Vvi16g0647 718 SUPERFAMILY alpha/beta-Hydrolases 434 709 IPR029058 -
Vvi16g0647 718 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 56 236 IPR036155 -
Vvi16g0647 718 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 58 190 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0647 Vvi-Chr16 13310807 13327556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0647 - - vvi:100259267 1412.9