Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0644 | ATGAGTGTGGGTGACGATGAGAGCAGGATTGTTCTTATTGCTAAGACCAATGTCGCTGCTGGCGATGAGCTAACGTATGACTACTTGTTTGATCCCGATGAGCCGGACGAATGCAAGGTCCCCTGTTTGTGTAAAGCTCCAAACTGCAGAAAATTCATGAATTAG | 165 | 0.4606 | MSVGDDESRIVLIAKTNVAAGDELTYDYLFDPDEPDECKVPCLCKAPNCRKFMN* | 55 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0644 | 54 | Gene3D | SET domain | 1 | 54 | IPR046341 | - | |
| Vvi16g0644 | 54 | SUPERFAMILY | SET domain | 3 | 54 | IPR046341 | - | |
| Vvi16g0644 | 54 | ProSiteProfiles | Post-SET domain profile. | 38 | 54 | IPR003616 | - | |
| Vvi16g0644 | 54 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 | 7 | 54 | IPR044570 | GO:0042800|GO:0051568 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0644 | Vvi-Chr16 | 13248951 | 13249373 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0644 | - | - | vri:117933884 | 118.627 |