Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0642 ATGACAGTAACTCCTTTTCGACGTTTCATCACTGTTTTGGTCCGCTTGAATCTGCAATTCAAAACCACAACAACAACAAACTTGGTAATTTTGAGGCTCATACGGAGCCGCCGCAGCAGCCAAGTCACCGGCGGCGTTACCTCCGGCCACCCAAAAATGTTAACCCTAGTTCGCAGAGCCGCCTCGAGTCTCTGTCTCAGGTTTCTTCACAACCAATGCAATTTGGAGCGTATTGGGAGCCACCGTTTACACACGTCTGGCCTCTACGGATTTGATCTCCTGAAGACGCCTAAAGGCTTTCAGCGCTTTGTTGACGAAGCCATTGAACGGTCCAGTGAACTGGTTACTTACATTTCTGGAATGCCTTCATCAGCAGAAATCGTCAGAGCCATGGATGAGATATCAGATGCAGTTTGTTCAGTTGTTGACTCAGCAGAGCTTTGTAGACATACTCATCCAGATAGGGAATTTGTTGAGGAGGCTAACAAGGCATCTATGAGAATTAATGAATATCTACATTATCTCAACACAAATCATAGTCTTTATCATGCGGTGTTGAAAGTTGAAAAAGATCGTAATTTGCTTAGCAAAGAAGCTAAAAGGGCAGCCCATTACTTACGTGTTGACTTTGAGAAGGGTGGAATCCATCTTGCAGCTGATAAGCTTGATCGAGTTAATCAGCTGCACGTAGAAATTGCTCATCTGTGCAGGGAGTTTAGTGAAAATATTATCACAGACCCAGGTTCTGTAGATATATTTCCGGCATCAAGGATTCCAAAACATTTGCACCATCTTTTCAAGCCTATTTATGGTTTAAATTCCAGTACTTTAAGAGGATCTTCAGGATCAAGAGATAACATCAAGGAAAAGGGATTTCGGATAACAACAGAGCCGGGAACTTTATCCTCTATTCTGCAATGGGCATCAGATGCTGAGGTTAGGAAAATGGCATACATACAAGGAAATTCTGTTCCCCATGCAAACCTCGCTGTACTTGATAAACTTATAGCTGCCCGACATGAGATTGCTCAGATAATGGGGTATAAATCTTATGCTGAATTTGCAGTGCGTCCAAACATGGCTTCATCACCAGAGGTTGTGATGTCCTTTTTGTTTGAGATGAGCAAGATGATCAGGCCCAAGGCTGATGAGGAGTTTAAGGCAATTAGGGATTTCAAGAAGGCGAGAACTGGTCAAATATGTGAAGATTTAGAGCCATGGGATGAGGCATACTTCACAGGGATGATGAAGTCTTCTGCCTACAACTTGGACTCCTCGGTTGTAGCATCATATTTTCCTTTGCATCAATGTATTGAGGGTTTGAAAGTGCTGGTGGAATCATTATTTGGTGCCACCTTTCGTTCGATCCCTCTTGCACCAGGTGAATCCTGGCATCCAGATGTGCTTAAAATGTCACTACATCATCCTGAGGAGGGTGATTTGGGGTATCTTTACCTTGATTTATGCTCAAGGAAGGACAAGTATCCAGGTTGTGCTCATTTTGCCATTAAAGGAGGGCGACGGCTGTCTGAAACAGAATACCAACTTCCTGAAATTAAAATTGAAAATCAAATTTCTTTCTGGATTCTCCTATAA 1596 0.4292 MTVTPFRRFITVLVRLNLQFKTTTTTNLVILRLIRSRRSSQVTGGVTSGHPKMLTLVRRAASSLCLRFLHNQCNLERIGSHRLHTSGLYGFDLLKTPKGFQRFVDEAIERSSELVTYISGMPSSAEIVRAMDEISDAVCSVVDSAELCRHTHPDREFVEEANKASMRINEYLHYLNTNHSLYHAVLKVEKDRNLLSKEAKRAAHYLRVDFEKGGIHLAADKLDRVNQLHVEIAHLCREFSENIITDPGSVDIFPASRIPKHLHHLFKPIYGLNSSTLRGSSGSRDNIKEKGFRITTEPGTLSSILQWASDAEVRKMAYIQGNSVPHANLAVLDKLIAARHEIAQIMGYKSYAEFAVRPNMASSPEVVMSFLFEMSKMIRPKADEEFKAIRDFKKARTGQICEDLEPWDEAYFTGMMKSSAYNLDSSVVASYFPLHQCIEGLKVLVESLFGATFRSIPLAPGESWHPDVLKMSLHHPEEGDLGYLYLDLCSRKDKYPGCAHFAIKGGRRLSETEYQLPEIKIENQISFWILL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0642 531 Gene3D Neurolysin, domain 3 213 478 IPR024077 -
Vvi16g0642 531 Pfam Peptidase family M3 306 519 IPR001567 GO:0004222|GO:0006508
Vvi16g0642 531 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 83 521 - -
Vvi16g0642 531 FunFam Uncharacterized protein 213 441 - -
Vvi16g0642 531 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 85 517 IPR045090 GO:0004222|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0642 K01410 - vvi:100262804 938.717