Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0636 ATGCATGTCTTGATTATCTTGGAAGAAGATGCTTCCTTCCTCCGATATGGTTACTTGTCACCCGACAATGCTGCTGGAATTAGCCAAAAAGTAACAATACTCTACAGTGAATTGCGACCACATGCCCTTGCCTTGATTCAAAGTTTGGGTGTTGGAAATTTAAGGCTTTCCTATAAAGTAATGCTTCAAGATGGAGGCAAGAGACTTGGTTGTAGATATATACATGAGCAACTTAATTTAAGTTTATGTATATTGTCTTATAGTGTGTTTTTAACTTCATTGTATATTATATGA 294 0.3571 MHVLIILEEDASFLRYGYLSPDNAAGISQKVTILYSELRPHALALIQSLGVGNLRLSYKVMLQDGGKRLGCRYIHEQLNLSLCILSYSVFLTSLYII* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0636 97 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 5 55 IPR036250 GO:0016627
Vvi16g0636 97 Gene3D - 1 49 - -
Vvi16g0636 97 Pfam Acyl-CoA oxidase 5 50 IPR002655 GO:0003997|GO:0005777|GO:0006635
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0636 Vvi-Chr16 12960043 12960627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0636 1 57 Acyl Lipid Metabolism Gene Families AT1G06290 56.140 7.20e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0636 K00232 - vvi:100257524 89.7373