Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0633 ATGAACAAATCTTGCCCTGTCGTTCCATCTCAGCTCACAAGTTCTACCCTCAGAAGTAGCCAATTCCAGACTAATATATTCTGCCTGAGGGAGCGAGATCTATTGATCCATTTTGCTGCTGAGATATCACAGCTTCAAGCACATGGCCTAAGCAGAGAGTATGCACTTCTTCAGGATCGAGCAATTTTGCAGATCTTTTTAGATGCTGAGGCAGCTGTGTCTTCTGGTCCACTTAAGAGCATGTTAAGTCTATTAAGATCCATGCATGTCTTGATTATCTTGGAAGAAGATGCTTCCTTCCTCCGATATGGTTACTTGTCACCCGACAATGCTGCTGGAATTAGCAAAAAAGTAACAATACTCTACAGTGAATTGCGACCACATGCCCTTGCCTTGGTCAGCTCCTTTGGCATCCCTGACGCATTTTTGAGCCCAATTGCTTTCAATTGGATCGATGCAAATTCTTGGTCACCGGTTCAGCCCCAACAAGGGGCCACAGTTTCTCTCTAG 510 0.449 MNKSCPVVPSQLTSSTLRSSQFQTNIFCLRERDLLIHFAAEISQLQAHGLSREYALLQDRAILQIFLDAEAAVSSGPLKSMLSLLRSMHVLIILEEDASFLRYGYLSPDNAAGISKKVTILYSELRPHALALVSSFGIPDAFLSPIAFNWIDANSWSPVQPQQGATVSL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0633 169 FunFam Acyl-coenzyme A oxidase 21 136 - -
Vvi16g0633 169 Pfam Acyl-CoA oxidase 62 143 IPR002655 GO:0003997|GO:0005777|GO:0006635
Vvi16g0633 169 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 17 146 IPR036250 GO:0016627
Vvi16g0633 169 Gene3D - 21 137 - -
Vvi16g0633 169 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 10 147 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0633 Vvi-Chr16 12886935 12888152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0633 1 159 Acyl Lipid Metabolism Gene Families AT1G06290 59.302 2.28e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0633 K00232 - vvi:100257524 286.189