Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0631 ATGGGGATTCACGAAGCCCTCGCTCGCTCCTCCATGATCAGAAACGTGCTGCCCAGACATGAGCAAGGGGGCATCTTTGCGGCAGACGGCTATGCTCGCGCTTCTGGACGCCCTGGTGTCTGCCTCACCTCCTCTGGTCCAGGCGCCACTAATATTATCAGCGGCATTGCGGATGCAAACTTCGATAGCATACCCATCGTGGCCATTACTGGGCAGGTCCCACGAGGCTTGATGGGAACCGATGCCTTCCAAGAAGTCCCACTTATTGATATAACTCGACCGATCACAAAGTTCAATTATTTAGTTCTTGATGTTGAAGACATTCCTCGCATAGTTAAAGAAGCCTTTCTCCTTGCAACTTCAGGCCGACCTGGTCCGGTATTGATCGATATACCAAGAGATATACAAAAAGAGCTCGTGGTTCCGAATTGGAATAAGCCAATTATGCTGCCTGGGAATGCATCCAGATTGCCTAAATTGCAGGAAAAGGCCCACCTGGAAGAAATTGTTCGATTAATTTCAGTGTCAAAGAGGCCAGTTGTGTATGCTGGTGGAGGGTGTATGAACTGCAGTGAAGAGTTAAGGCGGTTTGTGGGGCTCACTGGTATACCTGTGGCAAGTACTTTAATGGGTCTAGGGATTTTCCCATGCACGGATGGCCTATCTCTTCACATGCTCGGAATGCATGGGACTATACAAGCAAACTACGCTGTGGACAGGTCTGATTTGTTGCTAGCATTTGGTGTCCGATTTGACGATCGGGTAACAGGTAAAGTTGAAGCTTTCGCTAGAAATGCTACAATTGTTCATATTGATATTGATCCAGCAGAAATCGGAAAGAACAAAAAACCCCATCTTTCAATTTGCACTGATGTAAAGCTGGCATTGGAAGGCATCAACACGATCTTGGAGAAGAATGCAGCAAAGCAACCCACTGCAGAAAACAAAAGAGGAAAAGGGACAAAGTTTAATGACAATGTATCGGCTTGGATAGAGGAAATTGATGAGCAGAAAGAGAAATAG 1023 0.4653 MGIHEALARSSMIRNVLPRHEQGGIFAADGYARASGRPGVCLTSSGPGATNIISGIADANFDSIPIVAITGQVPRGLMGTDAFQEVPLIDITRPITKFNYLVLDVEDIPRIVKEAFLLATSGRPGPVLIDIPRDIQKELVVPNWNKPIMLPGNASRLPKLQEKAHLEEIVRLISVSKRPVVYAGGGCMNCSEELRRFVGLTGIPVASTLMGLGIFPCTDGLSLHMLGMHGTIQANYAVDRSDLLLAFGVRFDDRVTGKVEAFARNATIVHIDIDPAEIGKNKKPHLSICTDVKLALEGINTILEKNAAKQPTAENKRGKGTKFNDNVSAWIEEIDEQKEK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0631 340 Gene3D - 1 157 - -
Vvi16g0631 340 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 1 339 IPR045229 -
Vvi16g0631 340 FunFam Acetolactate synthase 1 152 - -
Vvi16g0631 340 CDD TPP_PYR_POX_like 1 133 - -
Vvi16g0631 340 SUPERFAMILY DHS-like NAD/FAD-binding domain 164 338 IPR029035 -
Vvi16g0631 340 Pfam Thiamine pyrophosphate enzyme, central domain 167 297 IPR012000 GO:0000287|GO:0030976
Vvi16g0631 340 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 139 IPR012001 GO:0030976
Vvi16g0631 340 FunFam Acetolactate synthase 159 340 - -
Vvi16g0631 340 Gene3D - 161 340 - -
Vvi16g0631 340 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 1 147 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0631 Vvi-Chr16 12842472 12843494 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0631 K01652 - vvi:100246801 667.922