Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0629 ATGGCCTCAGTGGAGGAAATTAGAAGACATGCCCAGCGGCCCCGCGGCCCGGCCACCATTCTAGCCATTGGCACAGCACTACCGGATAACTGCTTTCCCCAGGCTGAATTTCCTGATTTTTTCTTTTGGGCCACCAAGAGCGAGCACTTGGCTCAATTGAAAGAAAAGTTCAAGCTCATTTCAAAACTCAGCTTAAAAAAGGAAAAACTCGAAGTTAGTAGGCATGTGCTAAGGGAGTATGGAAATATTGTGAGTCCATGCGTGTTCTTTGTCATGGATGAGACGAGAAAAAAGTCTTTCAAAGAAGAAAAGGCTACTACAGGGGAGGGATTGGAGTGGGGTGTTTTGTTGGGGTTTGGACCAGGCTTGACAGTGGAGACGATTGTGCTACGCAGTCGGTGA 402 0.4776 MASVEEIRRHAQRPRGPATILAIGTALPDNCFPQAEFPDFFFWATKSEHLAQLKEKFKLISKLSLKKEKLEVSRHVLREYGNIVSPCVFFVMDETRKKSFKEEKATTGEGLEWGVLLGFGPGLTVETIVLRSR* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0629 133 SUPERFAMILY Thiolase-like 59 132 IPR016039 GO:0016746
Vvi16g0629 133 Gene3D - 39 133 IPR016039 GO:0016746
Vvi16g0629 133 SUPERFAMILY Thiolase-like 7 74 IPR016039 GO:0016746
Vvi16g0629 133 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 8 61 IPR011141 GO:0009058|GO:0016747
Vvi16g0629 133 Pfam Chalcone and stilbene synthases, C-terminal domain 41 132 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0629 Vvi-Chr16 12763168 12764673 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0629 K00660 K21384 vvi:100267962 142.51