Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0623 ATGATTAAGAAACGTTACATGCATCTGAGTGAAAAAATTATTAAAGAGAATCCAAATATAGGCGCCTCCTTGGATGCTCGTCAAGATATTGCCAACGTTGAGGTACCAAAACTGGGAAAAATTGCAGCAGTAAATGCCATCGGAGAGTGGGGACAGCCCAAATCTAGGATCACACATCTTGTATTCTGTACAACCACGAGCTTACACATGCCTGGTGCCGACTATCAACTTGCTAAGATCCTAGGTCTTGAACCAAAGGTTAAACGGGTGATGTTGTACCTTCAAGGTTGCTTTGGTGGTGGGACTGTCCTCAGAATGGCTAAAGATCTAGCAGAGAACAACGTAGGTGCTCGTGTTCTTGTAGTATGTTAA 372 0.4328 MIKKRYMHLSEKIIKENPNIGASLDARQDIANVEVPKLGKIAAVNAIGEWGQPKSRITHLVFCTTTSLHMPGADYQLAKILGLEPKVKRVMLYLQGCFGGGTVLRMAKDLAENNVGARVLVVC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0623 123 Gene3D - 1 123 IPR016039 GO:0016746
Vvi16g0623 123 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 123 IPR011141 GO:0009058|GO:0016747
Vvi16g0623 123 Pfam Chalcone and stilbene synthases, N-terminal domain 1 123 IPR001099 -
Vvi16g0623 123 SUPERFAMILY Thiolase-like 1 123 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0623 Vvi-Chr16 12591958 12592329 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0623 K00660 - vvi:100854415 244.588