Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0621 ATGTGGAGACGTGTGACTTCGCTTTCTCCATTTATTTCTTCTTCCAAACCATCTATTCGTAACCAGGCATCATATGGAGGGAAGATTTGGGAGTTATTCACCACAGAAATACTCACTCCGGCAAAAGCTGGAATATCTTCTGATGAGAAAACACCATTCATAACTTTTGTTGTAGGTGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAGATTGTTGAGACCTTTGGATTTACACACATAAGTGCTGGAGAACTGTTAAGGAGGGAAATATCTTGTAATAGTGAACATGGTTCCATGATTCTAGACAGTATTAGAGAGGGAAAAATCGTCCCTTCAGAAGTGACAGTCAAACTGATTGAGAAGGAAATGGAGTCAAGTAAAAATAATAAATTTCTCATTGATGGATTTCCGCGAACTGAGGAGAACCGCATTGCATTTGAAAGAGTTATTGGAGCAGAACCAAACTTTGTGCTTTTCTTTCATTGCCCTGAAGAAGAGATGGTGAAGCGACTGCTAAGCCGTAATGAGGGCCGAGTTGATGACAACATAGATACAATCAAGAAACGGCTTGAAGTTTTTACAGCATTGCATCTTCCTGTTATCAAATATTACTCTGAGAAGGGAAAGCTTTACAAGATTAATGCAGTAGGTACCGTGGATGAGATTTTTGAACAAGTTCGCCCAGTTTTTGCTGTATGTGAGGCAACTAAATGA 717 0.3989 MWRRVTSLSPFISSSKPSIRNQASYGGKIWELFTTEILTPAKAGISSDEKTPFITFVVGGPGSGKGTQCAKIVETFGFTHISAGELLRREISCNSEHGSMILDSIREGKIVPSEVTVKLIEKEMESSKNNKFLIDGFPRTEENRIAFERVIGAEPNFVLFFHCPEEEMVKRLLSRNEGRVDDNIDTIKKRLEVFTALHLPVIKYYSEKGKLYKINAVGTVDEIFEQVRPVFAVCEATK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0621 238 CDD ADK 56 223 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 NCBIfam UMP-CMP kinase family 54 231 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vvi16g0621 238 ProSitePatterns Adenylate kinase signature. 132 143 IPR033690 -
Vvi16g0621 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 229 IPR027417 -
Vvi16g0621 238 Pfam Adenylate kinase 57 209 - -
Vvi16g0621 238 Hamap Adenylate kinase [adk]. 53 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 Hamap UMP-CMP kinase [CMPK1]. 52 234 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vvi16g0621 238 PRINTS Adenylate kinase signature 196 210 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 PRINTS Adenylate kinase signature 179 194 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 PRINTS Adenylate kinase signature 132 148 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 PANTHER NUCLEOTIDE KINASE 47 227 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi16g0621 238 FunFam Adenylate kinase 1 46 234 - -
Vvi16g0621 238 Gene3D - 45 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0621 Vvi-Chr16 12537235 12548201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0621 K13800 - vvi:100248550 470.7