Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0601 ATGATGGTGGTTGGGAGGGTGACTTCACAGAATTATGAAGATGCCTTGACCAAGAGCATTTTGTTCTTTGAAGGCCAAAGATCTGGGAGGTTGCCTCCTTCGCAGAGGATGACTTGGAGGAAGGATTCTGCGCTTAATGATGGCACAGAGAGCAATGTGGACTTGGTAGGAGGATACTATGATGCTGGAGACAATGTAAAATTCAATTTTCCAATGGCATTCACCACAACCCTTCTAGCATGGAGTGTGTTGGAATTTGGGCAGTTCATGGGCTCAGACCTGCAATATGCACTAGATGCAATTCGATGGGGCACTGACTACTTCCTCAAGGCAACGAGCATCCCTGGCACTGTCTTTGCTATAGTTGGTGATCCATATGGTGACCATAGTTGCTGGCAAAGGCCTGAAGACATGGACACCCCTCGGACTTCATATGCCGTTACAACAACAAACCCGGGCTCAGAAGTCTCAGCAGAGATGGCTGCTGCCCTTGCAGCCTCTTCCATGGTATTTCAGGCTTATGATGCTCAATATTCCCTTACACTTCTCAACCGGGCTGCAATGGTGTTCGACTTTGCAGATATGTATAGGGGTTCCTATAATGATGTTTTTGGTGCGCTCGTCTGCCCATATTATTATTGTGATGGCAGCGGTTATGCGGATGAATTGATTTGGGCAGCAGCATGGTTGTACAAGGCAACTAATAACCAGTCTTATTGGGATTATGTTCTTAAGCACATTAACAGCTTGCCGCAGTATATAAAGAGGATGGATACGGATGGAATGCCAGTATCTGGGGGTAGCTTTGCAGAATTTGGATGGGATTCAAAACATGCAGGCATTAACATCCTTGTTTCCAAGTTGGTAATAGATAGACAACTCAACCCTAGTCCCTTTGTCTTCAACGCTGACAAATTTGCATGTTCCATATTGCCTGAATCACCAACGAAATCTGTCACATACTCTCCAGGTGGCCTTCTATTCAAACCTGGATCGTGTAACATGCAACATGTAACAGCACTGTCCTTTCTTCTTCTTGTTTATTCCCGCTACTCAAATGATGCCCAAAGAGGCATTCAGTGCGATAATTTTGTTGTCCCTCCTTCTAGGCTTGTGCAAGTCGCCCAAAGCCAGGTACGGCTGAAACTTTCAAATCAATGGATATATGTTCTATTGTAG 1179 0.4521 MMVVGRVTSQNYEDALTKSILFFEGQRSGRLPPSQRMTWRKDSALNDGTESNVDLVGGYYDAGDNVKFNFPMAFTTTLLAWSVLEFGQFMGSDLQYALDAIRWGTDYFLKATSIPGTVFAIVGDPYGDHSCWQRPEDMDTPRTSYAVTTTNPGSEVSAEMAAALAASSMVFQAYDAQYSLTLLNRAAMVFDFADMYRGSYNDVFGALVCPYYYCDGSGYADELIWAAAWLYKATNNQSYWDYVLKHINSLPQYIKRMDTDGMPVSGGSFAEFGWDSKHAGINILVSKLVIDRQLNPSPFVFNADKFACSILPESPTKSVTYSPGGLLFKPGSCNMQHVTALSFLLLVYSRYSNDAQRGIQCDNFVVPPSRLVQVAQSQVRLKLSNQWIYVLL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0601 392 Gene3D - 7 387 IPR012341 GO:0005975
Vvi16g0601 392 PANTHER ENDO-1,4-BETA-GLUCANASE 9 381 - -
Vvi16g0601 392 Pfam Glycosyl hydrolase family 9 12 359 IPR001701 GO:0004553|GO:0005975
Vvi16g0601 392 SUPERFAMILY Six-hairpin glycosidases 8 379 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0601 Vvi-Chr16 12145022 12147069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0601 10 379 Glycoside Hydrolase AT1G23210 55.526 1.63e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0601 K01179 - vvi:100251926 763.451