Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0597 ATGGAGTTTCTTGGGCACTCAACGTGGGTTCTTGTGCACATTGCGCTCTTCTCTGGCCTCTGTTTCGCTGCAGACCCATTTGTGAATTTCGAGCTGACCTACTCTTTTATCACTGCTTCTCCTTTGGGTGTTCCCCAGCAGGTTATAGCAGTTAATGGAAATTTTCCAGGTCATCCTTTGAATGTTACAACAAATAACAATGTTGTTGTTAATGTGACAAACAAATTGAATGAAGACCTCTTGATCACTTGGCCAGGGGTACAAATGCGCCGTAATTCTTGGCAAGATGGTGTTCTAGGCACAAATTGCCCTATACCATCTAACAGGAAGTGGGATTACCAGTTTCAGGTTAAGGATCAGATTGGCAGTTTCTTCTACTTCCCATCTCTCAATTTTCAGAGAGCAGCTGGTGGCTTTGGGTCATTTATTATTACTAACAGACCAGTTATCTCACTGCCTTTCGCAGCCCCAGATGGGGATATCATACTCCTCATTGGTGACTGGTACACACAAAACCATACGGCTCTGCGGCAGACCCTTAATGCTGGAAAAGACCTTGGGATGCCAGATGGAGTTCTCATCAATGGGAAGGGACCTTACAGATACAACACTACTCTTGTACCAGATGGAATAGCATATGAAACAGTTTCAGTTGAGCCAGGAAAAACTTATCGAGTTCGGGTTCACAATGTTGGAATCTCCACTAGTCTGAACTTCAGAATTCAGAACCATAATATGCTTCTAGTGGAAACAGAGGGACATTACACATCACAACAAAACTATAGTAACTTAGATATTCATGTTGGGCAGTCTTACACCTTTTTAGTTACCATGGATCAAAATGCAAGTACCGATTACTACATTGTGGCCAGTGCCAGGTTTGTGAATGAGTCACTTTGGCAAAGAGTTACTGGTGTCGCTGTGTTGCAGTACTCCAATTCTAAAGGAGCTGCAACTGGTCCTCTCCCTCCTGGGCCAGATGACTTGTATGACAAGACATTTTCAATGAACCAAGCAAGATCTATCAGGCAAAATGTATCTGCAAGTGGAGCTCGTCCTAACCCACAGGGGTCTTTTCACTATGGTTCAATCAATGTGACTGATACATATGTGTTAAGGAGCATGCCACTAGTGACAATTAACAACACACTTAGGGCTACATTTAATGGGATCTCATTTGTCAATCCCGAGACACCAATCAGGCTGGCTGACCAGCATAAAGTTAAGGGAGCTTACAAGCTTGATTACCCGAAAAAGCCTCTTACAGGAGCACCAAAACTTGATATATCTGTTATCAATGGTACATATAAGGGGTTTATAGAAGTTATATTGCAGAACAATGATACAATAATGCAGAGCTTCCACATGGATGGTTATTCATTTTTTGTGGTCGGGATGGATTATGGTAACTGGACAGAAAGCAGTAGGGGCACATACAATAAGTGGGATGCGATTGCTCGCTGCACAGCACAGGTTTTCCCTGGGGCATGGACAGCAGTGTTAATCTCTCTTGACAATGCTGGAGCATGGAATCTTAGAGTAGAAAACCTTGACAGATGGTATCTGGGCCAAGAAACATACATGAGAATCGTCAATCCTGAGGAAAATGGTGAAACAGAGTTTTCTGCTCCCAGTAATATTTTGTATTGTGGCGCTCTTAAGAATTTGCAAGGAAGCCAGAATTCAAGTAATGCTCCAATGTTGATCACCGGGTGGAAACTGAAGCTGTTTTTCACACTACTGCTGACACTATCTGCTGCCATTTCCATATCCTGCTAA 1779 0.4295 MEFLGHSTWVLVHIALFSGLCFAADPFVNFELTYSFITASPLGVPQQVIAVNGNFPGHPLNVTTNNNVVVNVTNKLNEDLLITWPGVQMRRNSWQDGVLGTNCPIPSNRKWDYQFQVKDQIGSFFYFPSLNFQRAAGGFGSFIITNRPVISLPFAAPDGDIILLIGDWYTQNHTALRQTLNAGKDLGMPDGVLINGKGPYRYNTTLVPDGIAYETVSVEPGKTYRVRVHNVGISTSLNFRIQNHNMLLVETEGHYTSQQNYSNLDIHVGQSYTFLVTMDQNASTDYYIVASARFVNESLWQRVTGVAVLQYSNSKGAATGPLPPGPDDLYDKTFSMNQARSIRQNVSASGARPNPQGSFHYGSINVTDTYVLRSMPLVTINNTLRATFNGISFVNPETPIRLADQHKVKGAYKLDYPKKPLTGAPKLDISVINGTYKGFIEVILQNNDTIMQSFHMDGYSFFVVGMDYGNWTESSRGTYNKWDAIARCTAQVFPGAWTAVLISLDNAGAWNLRVENLDRWYLGQETYMRIVNPEENGETEFSAPSNILYCGALKNLQGSQNSSNAPMLITGWKLKLFFTLLLTLSAAISISC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0597 592 Gene3D - 158 351 IPR008972 -
Vvi16g0597 592 Pfam Multicopper oxidase 161 313 IPR001117 -
Vvi16g0597 592 SUPERFAMILY Cupredoxins 154 353 IPR008972 -
Vvi16g0597 592 FunFam Monocopper oxidase-like protein 158 351 - -
Vvi16g0597 592 Pfam Multicopper oxidase 427 534 IPR011706 GO:0005507|GO:0016491
Vvi16g0597 592 Pfam Multicopper oxidase 38 147 IPR011707 GO:0005507
Vvi16g0597 592 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Vvi16g0597 592 Gene3D - 363 562 IPR008972 -
Vvi16g0597 592 PANTHER MULTI-COPPER OXIDASE 46 532 IPR045087 -
Vvi16g0597 592 SUPERFAMILY Cupredoxins 21 174 IPR008972 -
Vvi16g0597 592 Gene3D - 24 146 IPR008972 -
Vvi16g0597 592 FunFam Monocopper oxidase-like protein 363 561 - -
Vvi16g0597 592 SUPERFAMILY Cupredoxins 379 550 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0597 Vvi-Chr16 12077244 12082295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0597 - - vvi:100253642 1153.27