Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0596 ATGGGATGGTACCACCTCTTCTACCAGTACAATCCTGATTCAGCAGTGTGGGGGAACATCACGTGGGGCCATGCAGTGTCAAGAGACATGATCCACTGGCTCTACCTCCCCTTAGCCATGGTCCCCGATCGATGGTTTGATTTGAACGGCGTCTGGACCGGCTCTGCTACGATTCTGCCAAATGGCCAAATCATAATGCTCTACACCGGTGATACCAATGATTCTGTGCAGGTCCAAAATCTAGCATACCCTGCCAACCTGTCTGATCCCCTCCTCCTCCATTGGATCAAATATGAAAACAATCCGGTTATGGTCCCCCCAGCCGGAATCGGTTCCGACGATTTCCGGGACCCGACCACGATGTGGGTCGGAGCCGATGGAAATTGGCGGGTTGCAGTTGGGTCACTGGTCAATACAACAGGCATCGTGCTTGTATTTCAGACCACCAACTTTACCGATTTTGAGCTGTTGGACGGAGAATTGCATGGGGTTCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCCATCAATGGCGTATACGGGTTGGATACGTCGGCTCATGGGCCGGGCATAAAGCATGTGTTGAAGGCCAGCATGGATGATAACAGGCATGATTATTACGCATTAGGGGAGTATGACCCGATGACCGATACATGGACACCCGATGACCCGGAATTGGATGTGGGTATCGGGTTACGGCTTGATTATGGAAAGTATTATGCTTCAAAGACATTTTATGATCAGGTTAAGAAAAGGAGGATCCTATATGGTTGGATTTCGGAAGGTGATATTGAATCTGATGACTTGAAGAAAGGATGGGCTTCCCTTCAGAGTATACCAAGGACTGTTCTACATGACAATAAGACAGGAACCTATCTCCTTCTATGGCCAATTGAGGAGGTAGAGAGCTTGAGAACAAACAGTACAGAGTTCGAAGATGTTTTACTCGAACCCGGATCTGTTGTGCCACTTGACATAGGCTCAGCTTCACAGTTGGACATAGTGGCGGAGTTTGAGGTAGATAACGAGACCTTAGAAGCGATGGTGGAAGCTGATGTGATCTATAATTGTAGTACTAGCGCTGGTGCTGCTGGGAGGGGAGCCTTGGGGCCATTCGGCATTCTGGTTTTAGCAGATGATACACTTTCCGAGCTGACCCCAATTTATTTTTACATTGCCAAAGACACTGATGGCAGTTACAAAACCTTCTTCTGCACTGATCTATCCAGGTCGTCTTTGGCCGTGGATGATGTTGATCAAAGGATTTATGGGAGCATTGTTCCAGTGCTTGATGATGAAAAACCAACCATGAGGGTTCTGGTTGATCATTCGATTGTGGAAGGCTTTAGCCAAGGGGGGAGGTCATGTATCACGACCCGAGTTTATCCAACAGAGGCTATCTATGGAGCAGCTAGGTTATTCCTCTTCAACAATGCCACTGGAGTGAATGTCACAGCCAGTATCAAGATATGGGAAATGGCTTCTGCTGATATTCACCCTTACCCATTAGACCAACCATAA 1533 0.4808 MGWYHLFYQYNPDSAVWGNITWGHAVSRDMIHWLYLPLAMVPDRWFDLNGVWTGSATILPNGQIIMLYTGDTNDSVQVQNLAYPANLSDPLLLHWIKYENNPVMVPPAGIGSDDFRDPTTMWVGADGNWRVAVGSLVNTTGIVLVFQTTNFTDFELLDGELHGVPGTGMWECVDFYPVSINGVYGLDTSAHGPGIKHVLKASMDDNRHDYYALGEYDPMTDTWTPDDPELDVGIGLRLDYGKYYASKTFYDQVKKRRILYGWISEGDIESDDLKKGWASLQSIPRTVLHDNKTGTYLLLWPIEEVESLRTNSTEFEDVLLEPGSVVPLDIGSASQLDIVAEFEVDNETLEAMVEADVIYNCSTSAGAAGRGALGPFGILVLADDTLSELTPIYFYIAKDTDGSYKTFFCTDLSRSSLAVDDVDQRIYGSIVPVLDDEKPTMRVLVDHSIVEGFSQGGRSCITTRVYPTEAIYGAARLFLFNNATGVNVTASIKIWEMASADIHPYPLDQP* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0596 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 501 - -
Vvi16g0596 510 SUPERFAMILY Arabinanase/levansucrase/invertase 2 302 IPR023296 -
Vvi16g0596 510 CDD GH32_Fruct1-like 2 289 - -
Vvi16g0596 510 SUPERFAMILY Concanavalin A-like lectins/glucanases 301 500 IPR013320 -
Vvi16g0596 510 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 313 497 - -
Vvi16g0596 510 SMART glyco_32 2 457 IPR001362 GO:0004553|GO:0005975
Vvi16g0596 510 Gene3D - 313 497 - -
Vvi16g0596 510 Pfam Glycosyl hydrolases family 32 C terminal 304 496 IPR013189 -
Vvi16g0596 510 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 1 313 - -
Vvi16g0596 510 Gene3D Glycosyl hydrolase domain; family 43 1 312 IPR023296 -
Vvi16g0596 510 Pfam Glycosyl hydrolases family 32 N-terminal domain 2 301 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0596 Vvi-Chr16 12051811 12053766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0596 2 505 Glycoside Hydrolase AT1G12240 62.109 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0596 K01193 - vvi:100256970 1051.2