Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0593 ATGAGCAGGTTCAGTCGAATCGAGTTCTTCGAGCCCTATCCAAGTATTTCCCGCTGGGAAACCTCCATTTTCGCCCCTAAACCCTTGTTCTTTGCTGAAGATGATGACGACCTTTTCTACGGTCTCGATCTCTTCAAACCTGGCCCCGACCCCTATGAACTCTTTGACACCGTCACTGATCTGATTCAGATCAAGAAAACGACGCCTTTCTGCTCCTCCTACAAGAGGATTCACCGCCGAGTCGGGAGTGAACTCTACTTGCAGAGCCTCACTGACCGCGTCTCTGCGCTGGAGCTCAGCTTCGATCGCCTCCTAAAAGCCCGAACTTGTGGAGGAGATCGCAAGTACACCTGGACGGCGGAGATCAACAGTCCGGCGAAGAACGGTTTTGATAGGAAGTACAAATGGATGGCGGAGATCAAAGAAGGGAAAGCTAAAAAGAAAAGAGAGGAGAAGGTAGTGGAAAAGAACTACAAATGGACGGCTGAGATTAAGGGGAAAGGAGATGAGGCTCCGATCCTGCGGACGTACACGTGGAAAGTATCGAGTGGCGCGGCAGGGGAGTGCAGTGGAGTTGTGAAAGAGAAGAAAAAGGAGAAATGTAAGAAAGAGCTGGGAAGGACGCGTGTGGTGGAGATTGAAGAGGCTGCTGATAATGGGGCTGTGGTTTTAAGACAGGCCTTTGCCAAGAGAGTTGGAGCTGTGAAAAGCAAGGGAAAGAAAAAGGAATTGTCGCCACAAGATGCAGCAATTATGATCCAAATGAGCTTCAGAGCTTATCTGATACGTAGATCTCAGGCTCTTCGTGCCCTTCGAGAGCTGGCAGTTGCTAAGGCCAAGTTGAAGGAGATCAGAGTATTGTTTAACAACTATCGCCGTCGTGTAACTGATGATGCAGAGGAGCGCCAGAGGATCTCTGAGAAGATCATTGTCCTGCTCATACATGTAGATGATATTGAGGGAGCTGATCTCATGGTGCGAGCTGCAAAGAGGTCAATAGTGGACGAGCTGGAAGCAATGCTTGAGGTGGTGGACCCTCTGCCTCCTGGGAGGACTCTTTCAATGAGGAGGAGGATGTTTGATATGCCCAGTCGTGTCATTCAGAAGGAACTTGCTGAAGGTGTGGCACAGGTTGTCCAAATGCTAGATCAAGAAGAGAATGGTGCTGCCTTCGAGGCATGCTTGTAA 1188 0.4966 MSRFSRIEFFEPYPSISRWETSIFAPKPLFFAEDDDDLFYGLDLFKPGPDPYELFDTVTDLIQIKKTTPFCSSYKRIHRRVGSELYLQSLTDRVSALELSFDRLLKARTCGGDRKYTWTAEINSPAKNGFDRKYKWMAEIKEGKAKKKREEKVVEKNYKWTAEIKGKGDEAPILRTYTWKVSSGAAGECSGVVKEKKKEKCKKELGRTRVVEIEEAADNGAVVLRQAFAKRVGAVKSKGKKKELSPQDAAIMIQMSFRAYLIRRSQALRALRELAVAKAKLKEIRVLFNNYRRRVTDDAEERQRISEKIIVLLIHVDDIEGADLMVRAAKRSIVDELEAMLEVVDPLPPGRTLSMRRRMFDMPSRVIQKELAEGVAQVVQMLDQEENGAAFEACL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0593 395 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 113 348 IPR040400 -
Vvi16g0593 395 ProSiteProfiles IQ motif profile. 247 275 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0593 Vvi-Chr16 11982894 11990393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0593 - - vvi:100246705 736.487