Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0586 | ATGGGGATATTCAAGGGCAGTTTCTCATTCATGGTAGGAACCGCATGTGGAATTTACATAGCTCAGAATTACAACGTCCCCAATATAAAGAAACTCGCGAACACTGCTATTTTCATGGCCAGGCACCTCGAAGAGAAGTATCGCAAGCCTAAGAAGAGAGATGACGAGTAA | 171 | 0.4386 | MGIFKGSFSFMVGTACGIYIAQNYNVPNIKKLANTAIFMARHLEEKYRKPKKRDDE* | 57 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0586 | 56 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 16 | - | - | |
| Vvi16g0586 | 56 | PANTHER | OS07G0239500 PROTEIN | 1 | 55 | - | - | |
| Vvi16g0586 | 56 | Pfam | Domain of unknown function (DUF4535) | 7 | 50 | IPR027854 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0586 | Vvi-Chr16 | 11852918 | 11853088 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0586 | - | - | vvi:100263844 | 118.242 |