Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0580 ATGGAAATCCATGTGGTTGGTTTGCACCAGGATAGGAAAAGAAATGAGGTAGCCATTGCTGGTTCGAAGTCAAAGGTTGAATATATTCGAAGTGAGTTGAGGAGGCATATGAAGCTACGGCTAACTCAAGAGATACGCTTCATAGAGGATGAGTCTCTAGAGCAAGGAAGCTGGGTGATTGCAATATTGGATAGGATGAAGAATGAGAAAAAGATGGAAGAAAGCCAAGATCAATCGTCTAAATCATCTTATTTATCTCAAGATGATGACTGGGAGGGTGATGGTGATGACCCTAATGAGAACATTATTCATATAAAATAG 321 0.3988 MEIHVVGLHQDRKRNEVAIAGSKSKVEYIRSELRRHMKLRLTQEIRFIEDESLEQGSWVIAILDRMKNEKKMEESQDQSSKSSYLSQDDDWEGDGDDPNENIIHIK* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0580 106 Gene3D - 1 72 IPR015946 -
Vvi16g0580 106 MobiDBLite consensus disorder prediction 69 106 - -
Vvi16g0580 106 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 8 106 IPR000238 GO:0006364
Vvi16g0580 106 SUPERFAMILY Ribosome-binding factor A, RbfA 10 66 IPR023799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0580 Vvi-Chr16 11693051 11693600 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0580 K02834 - vvi:100267621 120.553