Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0579 ATGGGTTCAATGTTAGAACCATTACCAGCAACAAATTATAGGAAGCCACTGGGAATTAGATTCTTAGAGCACATTAAGAAGAAAACCCTGTCCTACAAAGCCTACCAGGCCATTGTCCTAATTGTGACATTTTTTGCATATGCAAGCTACCATGCTACTCGAAAAACCACAAGCGTTGTCAAAAGTGCGCTTGATCCTGAATCTGATGTAAGCTTGAAGTTTAGCCCATGGTGGAGAAAGAATCTTGGCAGACCAGTTTCATGGGCACTGGGAAGTGGATGGGCTCCATTTGATGGAGCAGATGGTACAGCTTTGCTTGGTGATATCGATGTTGCATTCCTTGGAGTATATGCCATTGGAATGTACTTTTCCGGGCACTTGGGCGATAGGTTAAACTTAAGAATCTTTTTGACAGTGGGAATGGTAGGAACTGGTTTGTTCACTTCGCTGTATGGTGTGGGTTACTGGGCAAATATCCATATTTTTTACTATTTCTTGATAGATCAGATGTTTGCTGGTTTGTTCCAATCAACTGGATGGCCCTCAGTAGTTGCTGTGGTAGGCAACTGGTTTGGAAAGAGCAAGAGAGGACTAATTATGGGGATATGGAATGCTCACACTTCGGTGGGGAACATTGCAGGTTCTGTGATTGCTTCAGTCCTATTAGCCTATGGGTGGGGATGGTCCTTTGTTGTTCCCGGCCTCATGATTGCTTTTGTTGGTCTGGTGGTTTTCCTCTTATTGCCTGTTAGTCCTGAATCTGTTGGAGCTGTTGCAGAGGAAGATCAAGTACACTCTCCCAGGAAAAATGGGGAGGAGGTAACTGAACCTCTATTGCAGTCGGATACAGAGGTTAAGAAGAAAGCCATAGGGTTCATTGAAGCATGGAAAATTCCTGGAGTTGCTCCTTTTGCTCTTTGCCTTTTCTTCGCCAAATTGGTTGCTTATACATTTCTTTATTGGCTTCCTTTCTACATTAGCCACACAGATATAGATGGCAAGTACTTATCCAGTGAGGCAGCTGGAAACTTATCTACAGTCTTTGATGTTGGAGGGGTGGTTGGAGGAATTCTAGCTGGCCATATTTCAGACCGCCTAGGTGCCAGAGCCATAACAGCAGCAAGTTTTATGTACTGTGCTATCCCTGCCCTCTTCTTCTACCGAAGCTATGGAAGCATTTCCGTGCCTGTAAATGTAGTGCTCATGTTCATCACTGGATTGTTTGTGAATGGCCCCTATGCTCTTATAACAACAGCCGTCTCGGCTGATCTGGGTACCCACAGTTCACTGGAAGGAGATTCAAGGGCATTGGCAACCGTAACAGCAATTATAGATGGCACAGGTTCTGTTGGGGCTGCTCTAGGCCCATTACTAACCGGCTACATCTCTGCCAAGAGCTGGAGTGCAGTTTTTACAATGTTGATGGCATCTGCTCTGGTGGCAGGCCTACTTTTAACTAGGCTTGTTGTGGCCGAGGTGGCTGCCAAGATCGCAGAATCAAGACGGCAAGGAGGGCCAACATCAAGATCTCCAGTACCGCTTGAAGTGTGA 1551 0.4565 MGSMLEPLPATNYRKPLGIRFLEHIKKKTLSYKAYQAIVLIVTFFAYASYHATRKTTSVVKSALDPESDVSLKFSPWWRKNLGRPVSWALGSGWAPFDGADGTALLGDIDVAFLGVYAIGMYFSGHLGDRLNLRIFLTVGMVGTGLFTSLYGVGYWANIHIFYYFLIDQMFAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSVIASVLLAYGWGWSFVVPGLMIAFVGLVVFLLLPVSPESVGAVAEEDQVHSPRKNGEEVTEPLLQSDTEVKKKAIGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYISHTDIDGKYLSSEAAGNLSTVFDVGGVVGGILAGHISDRLGARAITAASFMYCAIPALFFYRSYGSISVPVNVVLMFITGLFVNGPYALITTAVSADLGTHSSLEGDSRALATVTAIIDGTGSVGAALGPLLTGYISAKSWSAVFTMLMASALVAGLLLTRLVVAEVAAKIAESRRQGGPTSRSPVPLEV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0579 516 Gene3D MFS general substrate transporter like domains 294 502 IPR036259 -
Vvi16g0579 516 FunFam Sugar phosphate exchanger 3 isoform 1 30 263 - -
Vvi16g0579 516 PIRSF Hexose_phosphate_transp 14 505 IPR000849 GO:0016020|GO:0022857|GO:0055085
Vvi16g0579 516 Gene3D MFS general substrate transporter like domains 28 262 IPR036259 -
Vvi16g0579 516 Pfam Major Facilitator Superfamily 106 423 IPR011701 GO:0022857|GO:0055085
Vvi16g0579 516 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 13 506 - -
Vvi16g0579 516 FunFam glucose-6-phosphate exchanger SLC37A2 isoform X1 291 495 - -
Vvi16g0579 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 494 IPR020846 GO:0022857
Vvi16g0579 516 SUPERFAMILY MFS general substrate transporter 33 489 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0579 Vvi-Chr16 11684809 11686894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0579 1 512 Organic Solute Cotransporters AT3G47420 73.359 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0579 K13783 - vvi:100258691 1017.3