Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0578 ATGACTAATGTCTCTCTCCATCCAAAGATAGATGAAAGTCTCTTGACTCCAGAGCTTATGGGCATGTATGTTGTGTTCCTCTGCTGGTGTGCCATTAGAAGTGAACAACAAGAAAACAGATGCAATCAAGAGGCGGAATCAGCGACCAAAGCAGATTGGCTTACCATCATAAGCTTTGTTGTTGCGCTGCTTGCTGTGATCATTGTAATACTTTCAACAGACATTGATTCCAAATGCTTTCAGTCTAGGAAGGATGACTCACAAGCTAAAGATGATGTTTCTTATGGTTACAACTTCTTCTACTTTGTTTGTGCCATGGGAGCCATGCATTTTTCAATGCTATTGATTGACTAG 354 0.4068 MTNVSLHPKIDESLLTPELMGMYVVFLCWCAIRSEQQENRCNQEAESATKADWLTIISFVVALLAVIIVILSTDIDSKCFQSRKDDSQAKDDVSYGYNFFYFVCAMGAMHFSMLLID* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0578 117 PANTHER SERINE INCORPORATOR 1 117 IPR005016 GO:0016020
Vvi16g0578 117 Pfam Serine incorporator (Serinc) 2 81 IPR005016 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0578 Vvi-Chr16 11668130 11668483 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0578 K23544 - vvi:100254268 182.57