Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0577 ATGTATATTTGGTGTGTACCAGAACCGTCATACCTTCTTGACATTTTCTTCATCGCTTGGACATTAGTGCTCTTTCAGCTCATGACTAATGTCTCTCTCCATCCAAAGATAGATGAAGGTCTCTTGACTCCAGAGCTTATGGGCCTGTATGTTGTGTTTCTCTGTTGGTGTGCCATTCGAAGTGAACCACCAGAAAACAGATGCAATCAAGAGGCGGAGTCAATGACCAAAGCTGATTGGCTTACCATCATAAGATTTATTATTGCACTGCTTGCCGTGATCAATGTAATACTTTCAACAGACATTGATTCCAGATGCTTTCAGTTCAGGAAGGATGACTCACAAGCTGAAGATGATGTTTCCTATGGTTATGACTTCTTCTACTTTGTTTGTGCCATGGGAGCCATGCATTTTTCAATGCTATTGATTGACTAG 435 0.4115 MYIWCVPEPSYLLDIFFIAWTLVLFQLMTNVSLHPKIDEGLLTPELMGLYVVFLCWCAIRSEPPENRCNQEAESMTKADWLTIIRFIIALLAVINVILSTDIDSRCFQFRKDDSQAEDDVSYGYDFFYFVCAMGAMHFSMLLID* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0577 144 Pfam Serine incorporator (Serinc) 2 101 IPR005016 GO:0016020
Vvi16g0577 144 PANTHER SERINE INCORPORATOR 1 144 IPR005016 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0577 Vvi-Chr16 11652221 11652655 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0577 K23544 - vvi:100254268 233.032