Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0574 ATGGCTGCCCTTGCTCATAAAATCGTCATTCTAGTGACTCATCAAGTGGAATTTCTCTCTGAAGTCAATAAAATTCTGGTTGTGGAAGCTGGACAGATAACTCAATCAGGAAGCTATGAGGAGCTCTTGACATCCGGGACAACATTTGAGCAGCTTGTAAATGCATATAAGAATGCAATAACAATACTGGAATTTCCAAATGATGTACAAGTAGAACCTCAAAAATTGAATCAGAATCTACTAGAGAAGTCTCATGGATTTCTCTCCACCAAAGAAAACAGCGAATGA 288 0.3854 MAALAHKIVILVTHQVEFLSEVNKILVVEAGQITQSGSYEELLTSGTTFEQLVNAYKNAITILEFPNDVQVEPQKLNQNLLEKSHGFLSTKENSE* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0574 95 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 75 - -
Vvi16g0574 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 55 IPR027417 -
Vvi16g0574 95 Gene3D - 1 75 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0574 Vvi-Chr16 11582540 11582827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0574 - - vri:117922170 162.54