Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0572 ATGGACGCTCAGAGAGCTCTTCTAGACGAGCTCATGGGTGCAGCGAGAAACCTGACGGAAGAAGAGAAAAAAGGGTACAAGGAGGTTACTTGGGATGATAAGGAGGTTTGTGGATTCTATATGGTGCGGTTTTGTCCTCATGATCTCTTCGTCAACACTCGAAGTGATCTCGGACCATGCCCTAGAATTCATGATCAAAAGTTGAAAGAAAGTTTTGAAAAGTCTCCAAGACATGATTCATATGTGCCTCGCTTTGAAGCTGAGCTTTCTCAGTTTTGTGAGAAATTGGTTATGGACTTGGATAGAAGAGTGAGGCGTGGGCGTGAACGCCTTGCCCAAGAGGTGGAAGCAGCCCCACCTGCTCCACTTTCACTGGAGAAATCTGAGCAATTATCTGTGTTAGAGGAAAAAATAAAGAATCTGTTGGAACAAGTTGAGGCCCTTGGTGAAGCTGGCAAGGTGGATGAGGCTGAAGCACTCATGAGGAAGGTGGAGATGCTGAATGCTGAGAAGACAGTCTTGACTCAACAACCCCAGAATGACAAAGTCCTAATGCTTGCACAGGAGAAAAAGATGGCTCTGTGTGAAACCTGTGGTTCTTTTCTGGTAGCAAATGATGCTGCAGAGAGGACTCAGTCTCATGTCACAGGAAAGCAGCATATTGGTTATGGCATGGTTCGGGATTTCATCACTGAGTACAAGGAAGCCAAGGAGAAGGCAAGGGAAGAAGAAAGATTAAAGAGGGAGAAAGAAGCTGAAGAGAGGAGAAAGCAGAGAGAGAAGGAATCTGAGAGCAGAAGTCGAAGAGCTGATTCTGGTGATAGGGACAGGACTCGTGACCGAGATAGAGACAGGGAGCGGGATCGATACAGAGAACGAGAACGGGATCGTGAAAGGCCTCGAGAGTGGAATGGTAGAGGATACAGAGATGGAGGAAGAGGAACAGATTGGAGGTACAGCAATTCCAGGGATGGAAGAGATGGAGGCAGGGATAGGTACCGTGATCGGAGCAGGTCACGTTCCCCTGTTAGGCATAGCCACAGGAGGTCCCCTCAAAGTCCAGTTCGGCCATATTAG 1077 0.4791 MDAQRALLDELMGAARNLTEEEKKGYKEVTWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDSYVPRFEAELSQFCEKLVMDLDRRVRRGRERLAQEVEAAPPAPLSLEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVEMLNAEKTVLTQQPQNDKVLMLAQEKKMALCETCGSFLVANDAAERTQSHVTGKQHIGYGMVRDFITEYKEAKEKAREEERLKREKEAEERRKQREKESESRSRRADSGDRDRTRDRDRDRERDRYRERERDRERPREWNGRGYRDGGRGTDWRYSNSRDGRDGGRDRYRDRSRSRSPVRHSHRRSPQSPVRPY* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0572 358 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 339 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vvi16g0572 358 Coils Coil 226 263 - -
Vvi16g0572 358 Coils Coil 1 21 - -
Vvi16g0572 358 MobiDBLite consensus disorder prediction 238 338 - -
Vvi16g0572 358 Coils Coil 124 151 - -
Vvi16g0572 358 Pfam LUC7 N_terminus 2 250 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vvi16g0572 358 MobiDBLite consensus disorder prediction 238 358 - -
Vvi16g0572 358 Coils Coil 157 177 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0572 - - vvi:100265629 507.679