Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0569 ATGGCGGAGGGGGCTGTGCATTCGCGATATGTGAAGTTGACTAAAGATCAAGGGCCTGTGGAGGAGATTAAGCCTGGGGAGCTCAATCAGCCGATAGATGTTCCTCAGTTAAATGTTCGTAAATGCAATGAATGTGGACAACCTCTACCAGAAAGCTATGAACCTCCAGCAAATGAACCTTGGACAACTGGGATTTTCGGCTGTGCTGAAGATACAGAAAGTTGTTGGACTGGACTGTTTTGTCCATGTGTTCTTTTTGGACGTAATATTGAGAGCTTGAGAGAAGACACTCCCTGGACCACACCTTGCATTTGCCATGCCATTTGTATTGAAGGTGGCATTGCACTTGCAATAGGGACGGGGGTCTTCCATGGTATCGATCCAAGGACATCATTTCTCATCTGTGAGGGTCTGTTGTTTGCTTGGTGGATGTGTGGCATATACACTGGTCTAGTTCGGCAATCACTACAGAAGAAATATCATCTCCAGAATTCCCCATGCGACCCCTGCATGGTCCACTGCTGCATGCACTGGTGTGCGTTATGCCAAGAGCACAGGGAGATGAAGGGACGCCTCTCAGAAGACCTCGTCATGCCGATGACCATTGTCAACCCTCCCCCTGTTCAAGAGATGAATTCCGAAGAGAACAACCAGCAGGATGCTGCACCATCCTCTGCCAAGGGCACTGAGCACACCCATTTGGAAATGCAGGCTCTGTAG 720 0.4903 MAEGAVHSRYVKLTKDQGPVEEIKPGELNQPIDVPQLNVRKCNECGQPLPESYEPPANEPWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLREDTPWTTPCICHAICIEGGIALAIGTGVFHGIDPRTSFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLQNSPCDPCMVHCCMHWCALCQEHREMKGRLSEDLVMPMTIVNPPPVQEMNSEENNQQDAAPSSAKGTEHTHLEMQAL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0569 239 MobiDBLite consensus disorder prediction 205 239 - -
Vvi16g0569 239 NCBIfam uncharacterized Cys-rich domain 60 189 IPR006461 -
Vvi16g0569 239 PANTHER DUF614 FAMILY PROTEIN-RELATED 55 196 IPR006461 -
Vvi16g0569 239 MobiDBLite consensus disorder prediction 206 226 - -
Vvi16g0569 239 Pfam PLAC8 family 61 187 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0569 Vvi-Chr16 11481605 11488372 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0569 - - vvi:100255331 523.857