Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0568 ATGGAGAGACCAGAGTCAGAGGGCTTCGGAGGAAGAAGACGGAGACCGGTGAAGAACGAAGTCCCTGTCAGGGCGCAGCGTCCGCTCCGGCGCACGTTATCCTTGCCTCCAGCGGCGAAGCCTCCTCCTCCAGAGGTGAAGCTCGCGGCTGTGGCCGTTGATTTGAACGTGCGGCTGAGATCCGCCGACATGTCCGCTGCAATGCAAGAGCGTGCGTTCCGATACGCTAGATCCCTCCTCGATGCCCACTCCGATAACGTGCCTACTCCCACGCACCTAGCTATGCGTCTCAAGAAGGAATTTGATGCATTGTATGGCCCAGCATGGCATTGCATAGTTGGGAAGAGTTTTGGGTCATTTGTGACTCACTCATCCGGTGGATTTGTGTATTTCTCCATTGACAAGCTCTCTTTCCTCCTCTTCAAGACCGAGGTTCGACCCATCATCAAGTCTCCTTCATAG 462 0.5519 MERPESEGFGGRRRRPVKNEVPVRAQRPLRRTLSLPPAAKPPPPEVKLAAVAVDLNVRLRSADMSAAMQERAFRYARSLLDAHSDNVPTPTHLAMRLKKEFDALYGPAWHCIVGKSFGSFVTHSSGGFVYFSIDKLSFLLFKTEVRPIIKSPS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0568 153 FunFam Dynein light chain 47 144 - -
Vvi16g0568 153 Pfam Dynein light chain type 1 57 143 IPR001372 GO:0007017|GO:0030286
Vvi16g0568 153 MobiDBLite consensus disorder prediction 1 42 - -
Vvi16g0568 153 SMART Dynein_light_2 52 143 IPR001372 GO:0007017|GO:0030286
Vvi16g0568 153 CDD DLC-like_DYNLL1_DYNLL2 56 143 - -
Vvi16g0568 153 SUPERFAMILY DLC 55 143 IPR037177 GO:0007017|GO:0030286
Vvi16g0568 153 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 51 143 IPR037177 GO:0007017|GO:0030286
Vvi16g0568 153 PANTHER DYNEIN LIGHT CHAIN 55 143 IPR001372 GO:0007017|GO:0030286
Vvi16g0568 153 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0568 Vvi-Chr16 11479802 11480598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0568 K10418 - vvi:100250146 289.656