Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0566 ATGGCATCATCAATACCGTCTTCAAGCTTTGGCACTCCTCCTTCTATACTGAGTATTCAGGAGCTGGCCAAACAGCCCATGGCTACAGTGCCACAAATCTTTCTCTTGGAGGATCAGGAGCGTCCCGTTCTCTTAGAGAATGCTTCCCTCCCCGACATCCCCACCATCGACATGAAACGTTTGATTATGAGTGAAACCACAGATTTTGAACTAGACAAGTTGCACTCAGCTTGCAAAGAATGGGGCTTCTTTCAGATCATAGAAATTAACAATTGGGTTGATGCACAGTTGGTGAACCATGGAGTCAGTTCTTCCCTTGTGGAGAACCTGAAACATGAGATTGTAGAATTTTACAAGCTTCCCTTGGAAGAGAAGATGAAATATAAGATGCCAGGTGATGCTGAAGGATATGGGCCGTCTATAAGATCAGAAGATCAAAAACTTGACTGGGCTGATAGGTTTTACATGATAACCAAGCCTATTCATAGAAGGAAGCCACATCTATTGCCACAGCTCCCTCCATCACTAAGGGATAACTTGGAACTGTACATATCAGAGTCGCAGAAACTCGCCATGAGACTTCTAGGGTTGATGGCTAGAGCTATAAAGTTGGACAAGAGAGAGATGGAAGAGTTGTTTGATGATGGAAGGCAGGAAGTGAGGATGACTTACTATCCTCCATGTCCACAATCAGAGATGGTTATGGGCATTGCGCCTCACTCCGATCCTACAGGCATCACCATCCTTCTCCAAGTTAATGAAGTGGATGGTCTCCAGATAAAGAAAGATGGGGTTTGGATTCCTGTAAACCTCCTCCAAGATGCACTTGTAGTTAATGTGGGAGACATCCTGGAGATTGTGAGCAATGGGATGTATACTAGCATTGAGCATAGGGCAACTGTAAATAGTACAAAAGAGAGGATCTCTATTGCCATGTTTTTCAGCCCCAAATTTTCAGCTGAGATTGGACCCGCTCCTGGTTTGATAACTCCTCAAAACCCCCCAGTGTTCAAACGAATAGGCATGGAAAAATACTACCAAGATTTCTTCTCTCGCAAGCTGGATGGGAAATCTAACCTGGAGCATATGAAGATAAAAAAATGA 1104 0.4393 MASSIPSSSFGTPPSILSIQELAKQPMATVPQIFLLEDQERPVLLENASLPDIPTIDMKRLIMSETTDFELDKLHSACKEWGFFQIIEINNWVDAQLVNHGVSSSLVENLKHEIVEFYKLPLEEKMKYKMPGDAEGYGPSIRSEDQKLDWADRFYMITKPIHRRKPHLLPQLPPSLRDNLELYISESQKLAMRLLGLMARAIKLDKREMEELFDDGRQEVRMTYYPPCPQSEMVMGIAPHSDPTGITILLQVNEVDGLQIKKDGVWIPVNLLQDALVVNVGDILEIVSNGMYTSIEHRATVNSTKERISIAMFFSPKFSAEIGPAPGLITPQNPPVFKRIGMEKYYQDFFSRKLDGKSNLEHMKIKK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0566 367 Gene3D - 14 357 IPR027443 -
Vvi16g0566 367 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 316 IPR005123 -
Vvi16g0566 367 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 50 348 - -
Vvi16g0566 367 SUPERFAMILY Clavaminate synthase-like 17 357 - -
Vvi16g0566 367 FunFam Protein SRG1 14 356 - -
Vvi16g0566 367 Pfam 2OG-Fe(II) oxygenase superfamily 221 316 IPR044861 -
Vvi16g0566 367 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 160 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0566 Vvi-Chr16 11422046 11423535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0566 19 365 Glycosyltransferase AT5G59530 30.362 9.45e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0566 - - vvi:100246788 699.893