Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0561 ATGTCCAACGATGAGGAAAATCCCAAAGCTGTTGAGCCCCGCAAGGGCTCAGAAACCCTTTCCTCTTCCACCCAAAACCCAGCAACCTGCTGCAAAGCCTTGCTCCGCCAAGCTTCAATCTATGGAGTTGCCTTGGGATACTGCATCTCTGCGTCGCTCCTTTCCATCATCAACAAATGGGCAGTCATGAGATTCCCATATCCAGGAGCACTTACTGCTCTACAGTACTTCACAAGCGTCGCCGGAGTCCTCATCGGCGGGTGGCTCAAGCTCATAGATCATGGTGGTCTTCACGGCCACACGTTGTGGCGGTTCTTCCCGGCTGCAGTCTTGTTCTACATCTCCATCTTCACCAACAGCGAGCTCCTCCTCCACTCCAACGTTGACACGTTCATCGTGGTAAGGTCAGCTGTCCCCATCTTTGTTGCAGTGGGAGAGACCCTCTTCTTGCACCAGCCATGGCCGTCGGTAAAGACTTGGCTCTCCCTTGCCACCATCTTCGGTGGAAGTGTGCTTTATGTGCTAACAGATAATCAGTTCAGTGTCATGGCGTATAGCTGGGGAGTGGCCTACTTGGTGAGCATGTCCATAGACTTCGTATACATAAAGCATGTGGTTATGAACATAGGCTTAAAAACTTGGGGCCTTGTCCTCTACAATAATCTCGAGGCTCTCCTGCTGTTTCCATTGGAGTTGCTGGTAATGGGAGAGTGGGAGAAGCTAAGGCATGAGGTCCATGAATGGAATTGGTACTCCTTTGAGGTGGTTTTGCCAGTGGGTTTGTCATGTTTGTTTGGTCTATCCATCTCTTTCTTTGGGTTTTCTTGCAGAAGGGTGATTTCTGCAACTGGGTTTACAGTTCTTGGGACAGTGAACAAGCTGTTGACGGTGGTGATTAATCTGGTGGTATGGGACAAGCATTCTAAGTTTGTGGGGACTGTGGGGCTTTTGATTTGTATGATGGGTGGGGTTATGTATCAGCAATCCACAAGCAACAAAAGCCTACGGCCTGCAGCAAAAAAGTAA 1026 0.4951 MSNDEENPKAVEPRKGSETLSSSTQNPATCCKALLRQASIYGVALGYCISASLLSIINKWAVMRFPYPGALTALQYFTSVAGVLIGGWLKLIDHGGLHGHTLWRFFPAAVLFYISIFTNSELLLHSNVDTFIVVRSAVPIFVAVGETLFLHQPWPSVKTWLSLATIFGGSVLYVLTDNQFSVMAYSWGVAYLVSMSIDFVYIKHVVMNIGLKTWGLVLYNNLEALLLFPLELLVMGEWEKLRHEVHEWNWYSFEVVLPVGLSCLFGLSISFFGFSCRRVISATGFTVLGTVNKLLTVVINLVVWDKHSKFVGTVGLLICMMGGVMYQQSTSNKSLRPAAKK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0561 341 MobiDBLite consensus disorder prediction 1 25 - -
Vvi16g0561 341 PANTHER SOLUTE CARRIER FAMILY 35 43 330 - -
Vvi16g0561 341 Pfam Triose-phosphate Transporter family 51 326 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0561 Vvi-Chr16 11311623 11312648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0561 2 333 Lipid Metabolism Gene Families AT1G76340 74.474 2.81e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0561 - - vvi:100255202 657.907