Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0556 ATGGCACTTAAACCCCTCACCTCCGTCTTCCTCTCTCCTCTGTCCCTTCCCTACAGCCCCTCAAACCCCACCCCCAAATTCTCCAGTTTTTACACAAAACCAACTCCCATCTCATGCCAAACCCAAGCCCATCAACAAGCAGCCCCTACCTCCGACCCTTACCGTCCAGAATCCGATGGTTTAGGAGCAGCAGCCCCGACCCGAGGTGACCTATTCCTCGAGCATCATCAATCCGTGGCTGCTTCCGAGGTCGTGTTCAATGCGAATAAAAAGAAGAAGAAGGTGAAGTTTAGTGGGTCTTGGAAGGCTTCTGCTGCGAGTGCTTGTTATGGTTGCGGAGCTCCATTGCAGACTTTGGAAACTGATGCTCCTGGTTATGTTGATCCGGAAACGTATGAATTGAAGAAGAAACACCGCCAGCTTAGAACTGTTCTTTGTGGGAGGTGCCGGCTTTTGTCTCATGGGCAAATGATTACTGCTGTTGGTGGAAATGGAGGTTATTCTGGTGGGAAGCAGTTTATTTCAGCTGAGGAGCTCCGAGAGAAGTTATCTCACCTGAGACATGAGAAAGCCTTAATTGTTAAACTGGTTGATATTGTGGACTTCAATGGAAGTTTTTTGGCTCATGTTCGTGATCTTGCTGGTGCTAATCCAATAATATTAGTTGTAACAAAGGTTGATCTCCTTCCTAAAGAGACTGATCTTAATTGTGTGGGTGATTGGGTTGTTGAGGCGACCATGAAGAAGAAGCTTAATGTTCTGAGTGTCCATCTGACAAGTTCAAAATCTCTGGTTGGAATTTCTGGAGTTGCATCAGAAATTCAAAAGGAGAAAAAGGGTCGGAACGTGTACATTCTGGGCTCAGCTAATGTTGGAAAATCTGCATTCATCAATGCTCTACTAAAGATGATGGCCCAAAGGGATCCAGCTGCTGCAGCAGCACAAAGATACAAGCCGATACAATCTGCTGTTCCTGGAACTACCTTAGGTCCAATTCAAATTGATGCTTTCCTAGGTGGAGGGAAATTATATGACACACCTGGCGTTCATCTTCATCATAGGCAAGCTGCTGTTGTTCATTCTGAAGACCTACCTGCCCTTGCTCCTCGAAGTCGCCTCAGGGGCCAATGCTTTCCTAATTTTCAAGTGGCCTTTGATGATAGTACATTGAGCAGAATTAAATCTAATGGACTGAATGGGTTTTCAATATTCTGGGGAGGTCTTGTGAGAATTGATATTGTGAAGGTTCTCCCACAGACAAGATTGACATTCTACGGGCCTAAGGCATTAAATATTCATATGGTGCCGACTGACAAAGCAGATGAATTTTACCAGAAAGAACTTGGAGTTCTTTTGACACCACCAACTGGAAAACAGAGAGCAGAAGACTGGTTAGGGCTTGAAACAGAGCGCCAACTGCAAATAAAATTTGAAGATAGCGACAGGCCTGCATGTGATTTGGCAATCTCGGGCCTAGGATGGATTGCTGTTGAACCAATAGGCAGATCACTCAGAACTTCTGATTCAGATTTAGAAGAAACTGCCGAACAACTGCAGTTATCCATTCAAGTTCCGAAGCCGGTGGAGATATTTGTAAGGCCTCCAATTCCAGTGGGGAAGGGTGGAGGAGAGTGGTACCAGTACCGGGAATTGACTGAGAAAGAAGTGGAAGTGAGACCACAATGGTATTTCTGA 1695 0.4549 MALKPLTSVFLSPLSLPYSPSNPTPKFSSFYTKPTPISCQTQAHQQAAPTSDPYRPESDGLGAAAPTRGDLFLEHHQSVAASEVVFNANKKKKKVKFSGSWKASAASACYGCGAPLQTLETDAPGYVDPETYELKKKHRQLRTVLCGRCRLLSHGQMITAVGGNGGYSGGKQFISAEELREKLSHLRHEKALIVKLVDIVDFNGSFLAHVRDLAGANPIILVVTKVDLLPKETDLNCVGDWVVEATMKKKLNVLSVHLTSSKSLVGISGVASEIQKEKKGRNVYILGSANVGKSAFINALLKMMAQRDPAAAAAQRYKPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHSEDLPALAPRSRLRGQCFPNFQVAFDDSTLSRIKSNGLNGFSIFWGGLVRIDIVKVLPQTRLTFYGPKALNIHMVPTDKADEFYQKELGVLLTPPTGKQRAEDWLGLETERQLQIKFEDSDRPACDLAISGLGWIAVEPIGRSLRTSDSDLEETAEQLQLSIQVPKPVEIFVRPPIPVGKGGGEWYQYRELTEKEVEVRPQWYF* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0556 564 CDD YqeH 146 349 - -
Vvi16g0556 564 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 38 564 IPR044229 GO:0003924
Vvi16g0556 564 Gene3D - 177 353 IPR027417 -
Vvi16g0556 564 MobiDBLite consensus disorder prediction 41 61 - -
Vvi16g0556 564 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 176 352 IPR030378 GO:0005525
Vvi16g0556 564 Pfam 50S ribosome-binding GTPase 283 353 IPR006073 GO:0005525
Vvi16g0556 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0556 Vvi-Chr16 11185085 11218444 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0556 K13427 - vvi:100265605 1088.94