Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0549 | ATGTACATAAAGGACATCTGCTTGGAGGGCTTCAAATCCTACGCCACTCGCACGGTCGTCCCTGGCTTCGATCCCTACTTCAATGCCATCACCGGCCTTAATGGTTCCTGCAAGTCCAACATTCTTGACTCCATCTGCTTTGTGTTGGGCATTACCAATTTGCGGCAGGTTCTGGCTTCCAATCTCCAGAAGCTGGTCTATAAGCAAGGCCAAGCTGGGATTACCAAGGCCACCGTGTCGGTGGTGTTTGATAATTCTGATAGGAGTCGGAGTCCGCTCGGCTACCAGGATTGTCCAGAAATTACGAAAATACGGCAGATTGTGGTTGGTGGAAGGAACAAATACCTAATAAATAGACACCTTGCCCAGCCTAGTTGA | 378 | 0.4921 | MYIKDICLEGFKSYATRTVVPGFDPYFNAITGLNGSCKSNILDSICFVLGITNLRQVLASNLQKLVYKQGQAGITKATVSVVFDNSDRSRSPLGYQDCPEITKIRQIVVGGRNKYLINRHLAQPS* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0549 | 125 | Pfam | RecF/RecN/SMC N terminal domain | 2 | 122 | IPR003395 | - | |
| Vvi16g0549 | 125 | Gene3D | - | 1 | 124 | IPR027417 | - | |
| Vvi16g0549 | 125 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 1 | 124 | - | - | |
| Vvi16g0549 | 125 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 122 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0549 | Vvi-Chr16 | 11016586 | 11018174 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0549 | K06674 | - | vvi:100248523 | 253.832 |