Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0544 ATGTCAGGTGTTATACCAAGATGTCTTGGTAGTTTCACTGCCATGACTAAGAAAGAGAGCTTGGTCATTGCTCATAATTATTCATTTGGACCTTTTGGTGGTGTTCAATACCATATAGGTGGGAAGACACCTGAGAATGCCTCTTATGTTGATGGGGCGTTGGTTAAATGGAAAAGAAGAGAATTTGAGTATAAAAATACTCTTAGACTTGTAAAGAGTATTGATCTTTCAAGTAATAAGCTATCAAGGGAATTTCCAAGAGAAGTAATTGATCTTCTAGGATTAGTTTCATTAAAGTTATCAAGGAACAATTTGACTAGATTGATCCTTGCAAGAATTGGTCAATTGAAATCATTGGAGACTCTTTGGTGA 372 0.3548 MSGVIPRCLGSFTAMTKKESLVIAHNYSFGPFGGVQYHIGGKTPENASYVDGALVKWKRREFEYKNTLRLVKSIDLSSNKLSREFPREVIDLLGLVSLKLSRNNLTRLILARIGQLKSLETLW* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0544 123 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
Vvi16g0544 123 PANTHER OS10G0469600 PROTEIN 1 122 - -
Vvi16g0544 123 SUPERFAMILY L domain-like 44 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0544 Vvi-Chr16 10972341 10972712 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0544 1 122 Miscellaneous Gene Families AT1G74190 27.027 1.42e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0544 - K13466 vri:117933252 166.007