Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0529 ATGCAAAGAGCAAAAATCACTATGATGGAAGCTGTTGGACTTGAGGTCCTCTCTAACAAGCTTACAAGTTATGCTTCTAATCCACAAGTAGAGTTTGAGGATACTGAGGGTATATGGATTAGGGATTTGCTCCTGACTATTTTGTTCCGAGATGCAAATGTTGCTCTGGTCCCTGCAACCATGCGCATCATACAGTCACTTGCACTGAAGCCTGATGAAGTGATTGACAGATTCTTTGCTGCCCAGGCAATAGCAAGTCTTGTTTGTAATAGAAGCAGGGAAATAAATCTTACGATTATAAATGCAGATGCAGTTGCTGGGTTAATAACTCTAATTGGTTACGTAGAATCAGATATGCCAAACCTTGTTGTTTTATCTGAAGAGTTTTGTCTGGTTCGGAAACTTGTTCAAGTTGTTCTTGAAAATCTTTTTGAAATTGAAGACATAAGAGTTGGTTCCACTGCTCGCAAATTTATACCTTTATTAATGGATCTTTTGAGACCAATTCCAGACAGATCAAGTGTCCCTCCAATTGCTGCTCAACTATTGACTGGTATTACAGATGGAATTGATACAAACAAACTGATCATGGCTGAAGCTGGAGCATTGGATGCTCTAACCAAGTACTTGTCTTTGAGCCCTCAAGACTTTTCTGAGGCCACAGTGTCTGAGCTGTTGAGAATACTTTTTAGCAATCTTGATCTTCTTCGAGCATCTTCCAGTTTTGAGGAGTTGACAGCCTTGGCAATGGTTGGGGAAGAATTTGAACTTCAACAGCTGGATTTAGTGCCTACTGATGTATCCCTTCCGCTTTGGCATGCATTGGATAAGTTTATTATTCCTACTACATCTTCTGATACAATTAGATTGGACAATACCAAGTTTGAGGATACAAATTCTGTTGATGGATCCATGGCACATGACATGGAAGCAGGGATCTTCGCCAAGGTTCATGCTGAGAGAATAATTTCATCACTAAGACTCGGAATCCCATCAAGACCTCTCGTCAAAAGTTCTCCTCCTGTTTGA 1029 0.4043 MQRAKITMMEAVGLEVLSNKLTSYASNPQVEFEDTEGIWIRDLLLTILFRDANVALVPATMRIIQSLALKPDEVIDRFFAAQAIASLVCNRSREINLTIINADAVAGLITLIGYVESDMPNLVVLSEEFCLVRKLVQVVLENLFEIEDIRVGSTARKFIPLLMDLLRPIPDRSSVPPIAAQLLTGITDGIDTNKLIMAEAGALDALTKYLSLSPQDFSEATVSELLRILFSNLDLLRASSSFEELTALAMVGEEFELQQLDLVPTDVSLPLWHALDKFIIPTTSSDTIRLDNTKFEDTNSVDGSMAHDMEAGIFAKVHAERIISSLRLGIPSRPLVKSSPPV* 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0529 342 SUPERFAMILY ARM repeat 49 235 IPR016024 -
Vvi16g0529 342 Gene3D - 42 253 IPR011989 -
Vvi16g0529 342 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 2 250 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi16g0529 Vvi-Chr16 10304227 10306926 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0529 - - vvi:100260874 367.081