Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1285 ATGACAGTGAGATCACGTAAGCTAGAAATCACCGTTATTTCCGGCGAAAACATTCGCGTAACGGAAGATGCATACGTCGTCGTTCGGGCGGAGTCGTTGAGCTGCTGCACTACCAGAACGGCCAAAGACGATGGCACCAACTTCCTCTCGTGGAACGACAAGTTCCTGCTGGAAATGCCCGTGCATGCAAGATCGATCACATTCGAGGTCCAATGCAGCAAACTCAAGAGTTTTCGCCCACTTGGGGTGGCCAGAATCGCTGCCTCAGACTTCCTCGGCGGCGGCGCCGGCCCGGAAAATCAGTTGCAACAGTTGAGTTACGGGTTGAGGGACTGGGAAGGAAAGAGAAACGGTGTCATTCACTTTTCTGTGAGAGTGGCACCTCCGCCGCCGCCGTCGACACCGGTGAAGAAATGTCTTAAGCCCGCCGTGGAACAGGCGGTGACCAGAATGGGTTGCGGTGATCGAATCAAGGTCGGCGACAAGACCAAGGAAGTTGTAGTTGGTGTCCCATTTTGGTAG 522 0.5441 MTVRSRKLEITVISGENIRVTEDAYVVVRAESLSCCTTRTAKDDGTNFLSWNDKFLLEMPVHARSITFEVQCSKLKSFRPLGVARIAASDFLGGGAGPENQLQQLSYGLRDWEGKRNGVIHFSVRVAPPPPPSTPVKKCLKPAVEQAVTRMGCGDRIKVGDKTKEVVVGVPFW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1285 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 131 IPR035892 -
Vra9g1285 173 PANTHER INGRESSION PROTEIN FIC1 5 173 - -
Vra9g1285 173 Gene3D C2 domain 6 128 IPR035892 -
Vra9g1285 173 CDD C2_SRC2_like 7 122 IPR044750 GO:0006952
Vra9g1285 173 Pfam C2 domain 7 92 IPR000008 -
Vra9g1285 173 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 173 - -
Vra9g1285 173 SMART C2_3c 7 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1285 Vra-Chr9 20915319 20916070 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1285 - - gmx:100810797 253.832