Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1276 ATGGCTGCTCTAATCGCGTGTTTTCAATTCTTGACATCGTCACCTCGAGCAAAGGCGTGGCTAAAGAAGCAATTGATTCAATTGGACTTGTACGAGACAAGAGTTGGTGAAGTAAAAGATGTTGTGGAGAAGCTCAAGAACAAGAGAGATGCTATTCGGCATACAGTTGAAGAGGAAGAACGCCGACATGGAAGAAGAATTCACGATGAAGTTAAAGAATGGATGGAGAGTGTGGATAAACTCATTCGGGCATATGAGGATTTCCACAATGATGAAATATGCCATAAATGTGCGGTGTTTGACTTTTTCGACAGTGGTTACCTTCCGAAGCCAGGGATAAGGTATCGTCGAAGTAGAAAAGCAAATGAGATCACAAAGCAGGCAAATGGGTTGCTGCAAAATGCAAAGTTTGACATTTTATCTTATTGGTCTGGCCCACCCTCCATGGCTACCTTTTTTTCAAACCTTGGTTATGAAAGTTATTCATCAAGAAAAGAAACCGTGAAAAAGATTACTGCTGAATTTCAAAAGCCAGATGTTAGAATGATCGGTCTTCATGGGTTGAGTGGCGTTGGCAAGACATCTTTAGTCAAAGAGGTTGTGAAGAAAGCCTTGAAAGATAAGATGTTCGAAGTGGTGACCATGGCAAGTGTGACAAAAAACCCTGACGTAAGAAAAATCCAGGGACAAATTGCTGATATGTTGGGGGTTGTATTGGAGGAGGAAAGTGACATTGCAAGAGCTGCTAGGATACACCAGATATTGAATAATGAGAATAATAGCACGCTCATAATCCTAGACGATCTTTGGGAACAAGTGAACTTCAACTTGCTGGGGATTCCTTGTGAAATAGGGAAAGAAGATGGCGTAACAAATGTCCAAGGAAAATCCCTTGACGTTGATAGCTTGAAGAATGTTAGTGATGGAAAATCCCTTGATGTTGATATTTTGAAGAATGTTGTCGGTGATGGAAAATCCCCCATCCTTGGTAGTTCGACAAGTTTTAGAAAAGGAATGTTACAAGGAGCTGATGGTTCTAAGAATGTAAATAAAGGAAAATCCCTCGGTACTGCTGATTCGGTAAATGTCAAGAAAGGAGGATTCCTGGGTGGTAGTTTGAAGAATGTCAATGAAGGAAAATCCCCCCTTGATGCTTCTGAACGAGTTAAAGCAGAAAATTCTGTTCCTCAGTACAAAGGGTGCAAGATTTTGATGATTTCTGAAATTAAACAAGTGTTATTAAGTCAAATGGAAGGGAAAGAAGAGTGTATTTTCCCCGTGGAAATCTTAAAGGAGGAGGAAGCAGAGAAGTTGTTCAAGAAAAAGGCAGGAATAAGTGGTAAGAATTCTGAATATGACAAATTAGCAGCTCAAATTGCTAGCAAGTGTAAAGGGTTGCCAATGACAATAGTTACGACTGCAAGGGCATTGAAAAATAAGAGTCTTTCTGTATGGGACGAAACTAATCGAAAATTTGAATCTCAAAAGTTAACTGGAGCACCTGAATTTTCTACGAAGTTGAGTTATGAGCTCTTAGAAGATGAGGATCTCAAGTACACTTTCTTGCTTTGTGCTCGCATGGGTCATGATGCATTGATTATGGACTTGGTGAAATATTGTATTGGTATCGGTTTTCTTCGAGGAATCAACACAGCAAGGCAAACCAGAGACAGAGTATATACATTGGTCGCAAAGTTAAAAGAGTCAGGTCTGTTGTCTGACAGTTATTCAAGTGACCATTTTACCATGCCAGATACGGTTCGCAGAGCAGCTTTGTCCATAGCACATAAGGGAAATCAATTGTTTACAATGACAAAGGGAAAGCTAGATGAATGGCCCGATAAACTTGAAAGGTATGCTGCAATTTCATTACATCATTGTGACTTCATTGAAGATTTTTCTGGGAGAATAAAGTATCCAAGACTTAGAGTCCTTCAAATTGTCAATAATATTCCACGCCCGAAAATACCCAAAAACTTCTTCAAAGGAATGAAAGAACTTAGAGTGTTGATATTGACTGGTATTCATCTCCCCCTCATTGATTCTTCATTTTCATCCTTGCATAAACTTAGAATGCTTTGTTTGGAGCAATGCTGCATGCTAGATGAGGAGTTATCCATCCTAGGAGGGCTGAAAAAGTTAAGAGTTCTTAGTTTTTCAGGATCTGATATTAAAAGTTTGCCAGGCGAGTTGAATGAGCTAAAAATGCTACAAATTTTTGACATAAGTAATTGCTCTAAACTTAAAAAAATTCCACGTGGTGTCATATCTAGCTTGGTAAGTCTGGAGGAGTTGTATATGAGAAATACCTCGATTCAATGGGAGGATGAAGAACAAACATGTCAAAGTAAAACAGCTCTTCTTTCTGATTTGAAACATTTGAATCAATTGACAACTCTAGACATACAAATCCCAAATGTTTCGTATTTGCCAAAGAATTTGTTTTTTGACAAGTTGGACAGTTACAAGATTGTTATTGGAGATTTGAGTTCATTTTTAGAGACTGGTTTCCAGATGCCAGAGAGATATGAAACATTGAAATTTTTGGCTGTACAACTGGAAAATGGATCTGACATTCATTCTCTAATGGGGATAAAAATGCTGTTTGAAGGAGTTGAAAATTTGTTTCTAGAACTCAATACTGTCCATGAAAAGCACAATAGTGTCCGTGAAGCCCGTAATATTGTCCATGACCTTTTTTATAGATTGAATTTAAAAGGATTTCCATATCTCAGACATTTGTGGATTGTAAATAATTCTACCATTCAATCTCTCATACATCCAAAGGACAGGCAGCACCCTGAGAAAGCTTTTCCAAAATTGGAGTCATTGCATCTCTATAATCTCAAGATGGATGAAATATGCTCATGTAAACTTTCAGAACCCTCCTTTGGTAAACTGAAAGTCATTAAGATCAATCTCTGTGGTGTATTGAACAGTGTATTCTCAATTTCCATGGTTGGACTTTTAAAAGTTCTAGAAACAATTGAAGTTTCTGAATGTAGCTCTTTGAAGAAAATTATCAATGTGGGACCACCAATCAACCTTGAAAATACTGAGCTTCTTATGCTTCCTGAATTACGCTATTTGAAGCTACAATCTTTGTCTGAGTTTATTGGGTTTGATGCCATTCCTCCTATAGACCAAGGGGAAAGAAAACTCTTCCATGAAAAGGAAAGAGTTTGTAAAGAATTAAACTTTAAAAAGAGAAGAAGGTTGGAGTTTCAAAATTAG 3234 0.3788 MAALIACFQFLTSSPRAKAWLKKQLIQLDLYETRVGEVKDVVEKLKNKRDAIRHTVEEEERRHGRRIHDEVKEWMESVDKLIRAYEDFHNDEICHKCAVFDFFDSGYLPKPGIRYRRSRKANEITKQANGLLQNAKFDILSYWSGPPSMATFFSNLGYESYSSRKETVKKITAEFQKPDVRMIGLHGLSGVGKTSLVKEVVKKALKDKMFEVVTMASVTKNPDVRKIQGQIADMLGVVLEEESDIARAARIHQILNNENNSTLIILDDLWEQVNFNLLGIPCEIGKEDGVTNVQGKSLDVDSLKNVSDGKSLDVDILKNVVGDGKSPILGSSTSFRKGMLQGADGSKNVNKGKSLGTADSVNVKKGGFLGGSLKNVNEGKSPLDASERVKAENSVPQYKGCKILMISEIKQVLLSQMEGKEECIFPVEILKEEEAEKLFKKKAGISGKNSEYDKLAAQIASKCKGLPMTIVTTARALKNKSLSVWDETNRKFESQKLTGAPEFSTKLSYELLEDEDLKYTFLLCARMGHDALIMDLVKYCIGIGFLRGINTARQTRDRVYTLVAKLKESGLLSDSYSSDHFTMPDTVRRAALSIAHKGNQLFTMTKGKLDEWPDKLERYAAISLHHCDFIEDFSGRIKYPRLRVLQIVNNIPRPKIPKNFFKGMKELRVLILTGIHLPLIDSSFSSLHKLRMLCLEQCCMLDEELSILGGLKKLRVLSFSGSDIKSLPGELNELKMLQIFDISNCSKLKKIPRGVISSLVSLEELYMRNTSIQWEDEEQTCQSKTALLSDLKHLNQLTTLDIQIPNVSYLPKNLFFDKLDSYKIVIGDLSSFLETGFQMPERYETLKFLAVQLENGSDIHSLMGIKMLFEGVENLFLELNTVHEKHNSVREARNIVHDLFYRLNLKGFPYLRHLWIVNNSTIQSLIHPKDRQHPEKAFPKLESLHLYNLKMDEICSCKLSEPSFGKLKVIKINLCGVLNSVFSISMVGLLKVLETIEVSECSSLKKIINVGPPINLENTELLMLPELRYLKLQSLSEFIGFDAIPPIDQGERKLFHEKERVCKELNFKKRRRLEFQN* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1276 1077 Gene3D - 157 292 IPR027417 -
Vra9g1276 1077 SUPERFAMILY L domain-like 605 1027 - -
Vra9g1276 1077 PRINTS Disease resistance protein signature 182 197 - -
Vra9g1276 1077 PRINTS Disease resistance protein signature 256 270 - -
Vra9g1276 1077 PRINTS Disease resistance protein signature 463 477 - -
Vra9g1276 1077 PRINTS Disease resistance protein signature 732 748 - -
Vra9g1276 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 491 IPR027417 -
Vra9g1276 1077 Pfam NB-ARC domain 165 282 IPR002182 GO:0043531
Vra9g1276 1077 Pfam NB-ARC domain 397 498 IPR002182 GO:0043531
Vra9g1276 1077 Gene3D Ribonuclease Inhibitor 599 1047 IPR032675 -
Vra9g1276 1077 Gene3D - 429 513 IPR042197 -
Vra9g1276 1077 Coils Coil 28 62 - -
Vra9g1276 1077 PANTHER - 24 1040 - -
Vra9g1276 1077 PANTHER RPP4C4 24 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1276 Vra-Chr9 20665461 20668872 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1276 - - var:108346467 1821.98